RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 NEBLO76041 1014 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GNSP15586 552 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TNNI1P19237 187 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 EHHADHQ08426 723 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 NFIL3Q16649 462 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 SGSM1Q2NKQ1 1148 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TRIM61Q5EBN2 209 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 ANO7Q6IWH7 933 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 IL27RAQ6UWB1 636 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GLRX5Q86SX6 157 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 GPIHBP1Q8IV16 184 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 ARHGAP18Q8N392 663 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TMEM130Q8N3G9 435 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 PDILTQ8N807 584 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TERB1Q8NA31 727 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MLKLQ8NB16 471 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 MDGA1Q8NFP4 955 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CADM4Q8NFZ8 388 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 OR6B3Q8NGW1 331 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 TMC2Q8TDI7 906 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 ERCC4Q92889 916 aaPredicted RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 SLC2A11Q9BYW1 496 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 XPO4Q9C0E2 1151 aaKnown RBP6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CYP3A43Q9HB55 503 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
PTPRR-204ENST00000440835 A8MXQ7 604 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 F8VP50 259 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 IKBKBO14920 756 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 TIMM44O43615 452 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ACTN4O43707 911 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 LMO2P25791 158 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 PPP1R2P41236 205 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 PXNP49023 591 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 CASP5P51878 434 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ATXN3P54252 364 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 WNT7BP56706 349 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 STIM1Q13586 685 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 BRD3Q15059 726 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF667Q5HYK9 610 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 SDHAF4Q5VUM1 108 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 GBP6Q6ZN66 633 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ALLCQ8N6M5 410 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF557Q8N988 423 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 TXNDC5Q8NBS9 432 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 CCDC150Q8NCX0 1101 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 OR5B17Q8NGF7 314 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 SCFD1Q8WVM8 642 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 PIGKQ92643 395 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 GSDMAQ96QA5 445 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 B3GNT5Q9BYG0 378 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 XYLT2Q9H1B5 865 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 FAM204AQ9H8W3 233 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ANKZF1Q9H8Y5 726 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 CYLDQ9NQC7 956 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 KIAA1522Q9P206 1035 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 DKK4Q9UBT3 224 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 SCML2Q9UQR0 700 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 SLC27A6Q9Y2P4 619 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 GOLGA8IPA6NC78 632 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 GOLGA8JA6NMD2 632 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 IGLV3-19P01714 112 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ENGP17813 658 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 USP46P62068 366 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 PNOCQ13519 176 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 EIF4HQ15056 248 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 WDR72Q3MJ13 1102 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 C2orf27AQ580R0 203 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 SMYD5Q6GMV2 418 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 TMEM92Q6UXU6 159 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF662Q6ZS27 426 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 HDXQ7Z353 690 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 CBWD2Q8IUF1 395 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 GIMAP7Q8NHV1 300 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 UCMAQ8WVF2 138 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 HNRNPLLQ8WVV9 542 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 PMM1Q92871 262 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ZNF419Q96HQ0 510 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ZFRQ96KR1 1074 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 MRPL45Q9BRJ2 306 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 RNF38Q9H0F5 515 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 NUCKS1Q9H1E3 243 aaKnown RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 PCIF1Q9H4Z3 704 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 CD248Q9HCU0 757 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 OSGEPQ9NPF4 335 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 MBD1Q9UIS9 605 aaPredicted RBP6.31□□□□□ -1.4
PTPRR-204ENST00000440835 FBXO10Q9UK96 956 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 MYO15AQ9UKN7 3530 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 TCRBV21S2A2A0A5A6 115 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 BICDL2A1A5D9 508 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 TBC1D3BA6NDS4 549 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 SGK1O00141 431 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ARHGAP33O14559 1287 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 TGFB1I1O43294 461 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 COCHO43405 550 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ADAM23O75077 832 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ATP2C2O75185 946 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 CDK4P11802 303 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 BCKDHBP21953 392 aa6.31□□□□□ -1.4
PTPRR-204ENST00000440835 ATP5C1P36542 298 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms