RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 BEND5Q7L4P6 421 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 GLIS1Q8NBF1 620 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 SLC35B2Q8TB61 432 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 SP7Q8TDD2 431 aaPredicted RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 RNF139Q8WU17 664 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 SEC14L1Q92503 715 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 DPF3Q92784 378 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 SLCO2A1Q92959 643 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 RNF34Q969K3 372 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 LBHD1Q9BQE6 289 aaPredicted RBP19.81■□□□□ 0.76
SNX17-203ENST00000440760 ETNK2Q9NVF9 386 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 FAM153AQ9UHL3 310 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 YIPF1Q9Y548 306 aa19.81■□□□□ 0.76
SNX17-203ENST00000440760 CDH23Q9H251 3354 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 APOL1O14791 398 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 TEX28O15482 410 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 ARHGEF15O94989 841 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 MYOGP15173 224 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 ATF2P15336 505 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 CTNNB1P35222 781 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 TNNT3P45378 269 aaPredicted RBP19.8■□□□□ 0.76
SNX17-203ENST00000440760 RPL21P46778 160 aaKnown RBP19.8■□□□□ 0.76
SNX17-203ENST00000440760 FAM182AQ5T1J6 154 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 SND1Q7KZF4 910 aaKnown RBP eCLIP19.8■□□□□ 0.76
SNX17-203ENST00000440760 CCDC33Q8N5R6 958 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 ATL2Q8NHH9 583 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 NTAN1Q96AB6 310 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 ZBTB9Q96C00 473 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 TMEM121Q9BTD3 319 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 WDCPQ9H6R7 721 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 ALG13Q9NP73 1137 aaKnown RBP19.8■□□□□ 0.76
SNX17-203ENST00000440760 ZNF148Q9UQR1 794 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 HEY1Q9Y5J3 304 aa19.8■□□□□ 0.76
SNX17-203ENST00000440760 TBX18O95935 607 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 SPATA31D3P0C874 917 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 AMPD1P23109 780 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 RAB33AQ14088 237 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 TFDP2Q14188 446 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 C9orf50Q5SZB4 431 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 SLC9A4Q6AI14 798 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 FAM109BQ6ICB4 259 aaPredicted RBP19.79■□□□□ 0.76
SNX17-203ENST00000440760 SPATA31D4Q6ZUB0 917 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 GSTA5Q7RTV2 222 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 GRK7Q8WTQ7 553 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 LRRN4Q8WUT4 740 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 ASIC3Q9UHC3 531 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 CARNS1A5YM72 827 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 GRXCR1A8MXD5 290 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 SASH3O75995 380 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 F9P00740 461 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 RARGP13631 454 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 ARL4AP40617 200 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 TUFMP49411 452 aaKnown RBP19.79■□□□□ 0.76
SNX17-203ENST00000440760 SCAPQ12770 1279 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 EIF4EBP2Q13542 120 aaPredicted RBP19.79■□□□□ 0.76
SNX17-203ENST00000440760 MAP9Q49MG5 647 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 TPGS2Q68CL5 300 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 ZC3H18Q86VM9 953 aaKnown RBP19.79■□□□□ 0.76
SNX17-203ENST00000440760 NETO2Q8NC67 525 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 NKD2Q969F2 451 aaPredicted RBP19.79■□□□□ 0.76
SNX17-203ENST00000440760 GRHL1Q9NZI5 618 aa19.79■□□□□ 0.76
SNX17-203ENST00000440760 CHD9Q3L8U1 2897 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.78■□□□□ 0.76
SNX17-203ENST00000440760 LILRB3O75022 631 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 GAS8O95995 478 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 CNPP09543 421 aaKnown RBP19.78■□□□□ 0.76
SNX17-203ENST00000440760 ZSCAN5DPP0CG00 497 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 CTSAP10619 480 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 ETS1P14921 441 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 GDF10P55107 478 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 EIF3EP60228 445 aaKnown RBP19.78■□□□□ 0.76
SNX17-203ENST00000440760 GBE1Q04446 702 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 EFEMP1Q12805 493 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 CUL1Q13616 776 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 PTK6Q13882 451 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 NOMO1Q15155 1222 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 DRICH1Q6PGQ1 229 aaPredicted RBP19.78■□□□□ 0.76
SNX17-203ENST00000440760 VSIG1Q86XK7 387 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 PSTKQ8IV42 348 aaKnown RBP19.78■□□□□ 0.76
SNX17-203ENST00000440760 TTC13Q8NBP0 860 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 P3H4Q92791 437 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 C17orf80Q9BSJ5 609 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 ARHGEF4Q9NR80 690 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 TLR8Q9NR97 1041 aaKnown RBP19.78■□□□□ 0.76
SNX17-203ENST00000440760 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.78■□□□□ 0.76
SNX17-203ENST00000440760 NEU2Q9Y3R4 380 aa19.78■□□□□ 0.76
SNX17-203ENST00000440760 PRRG1O14668 218 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 MCF2LO15068 1137 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 GBP1P32455 592 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 ARL13BQ3SXY8 428 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 NCBP2-AS2Q69YL0 99 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 ARHGAP18Q8N392 663 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 ALLCQ8N6M5 410 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 PHOSPHO2Q8TCD6 241 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 TTLL2Q9BWV7 592 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 CCSER2Q9H7U1 834 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 FAM114A2Q9NRY5 505 aa19.77■□□□□ 0.76
SNX17-203ENST00000440760 XPO7Q9UIA9 1087 aaKnown RBP19.77■□□□□ 0.76
SNX17-203ENST00000440760 LINC01553A4QN01 128 aa19.77■□□□□ 0.75
SNX17-203ENST00000440760 ZNF487B1APH4 448 aa19.77■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms