RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 TRUB2O95900 331 aaKnown RBP18.78■□□□□ 0.6
CPSF4-205ENST00000440514 IGLV3-25P01717 112 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 CCDC172P0C7W6 258 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 UNGP13051 313 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-205ENST00000440514 MMP8P22894 467 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 RNASE9P60153 205 aaKnown RBP18.78■□□□□ 0.6
CPSF4-205ENST00000440514 CENPCQ03188 943 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 MTAPQ13126 283 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 GAS6Q14393 721 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 DGKKQ5KSL6 1271 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 OTUD1Q5VV17 481 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-205ENST00000440514 PHLDB2Q86SQ0 1253 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 SFTPA1Q8IWL2 248 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 ETFBKMTQ8IXQ9 262 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 FAM217AQ8IXS0 508 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 ZNF397Q8NF99 534 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-205ENST00000440514 CPLX3Q8WVH0 158 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 NUP58Q9BVL2 599 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 SPATA6Q9NWH7 488 aaPredicted RBP18.78■□□□□ 0.6
CPSF4-205ENST00000440514 PLK2Q9NYY3 685 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 MARK1Q9P0L2 795 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 COX16Q9P0S2 106 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 TLR6Q9Y2C9 796 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 MUC6Q6W4X9 2439 aa18.78■□□□□ 0.6
CPSF4-205ENST00000440514 ITIH6Q6UXX5 1313 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 CBFA2T2O43439 604 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 MOCS2O96007 188 aaPredicted RBP18.77■□□□□ 0.6
CPSF4-205ENST00000440514 GYPCP04921 128 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 TYRP14679 529 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 DRD1P21728 446 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 SCNN1AP37088 669 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 NSFP46459 744 aaKnown RBP18.77■□□□□ 0.6
CPSF4-205ENST00000440514 NUBP1P53384 320 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 RING1Q06587 406 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 TCF15Q12870 199 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 PTP4A2Q12974 167 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 NNTQ13423 1086 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 NUGGCQ68CJ6 796 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 PKN3Q6P5Z2 889 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 PHTF2Q8N3S3 785 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 EXOC4Q96A65 974 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 IQCDQ96DY2 449 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 SLC39A13Q96H72 371 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 ADAM33Q9BZ11 813 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 HAUS4Q9H6D7 363 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 METTL5Q9NRN9 209 aaKnown RBP18.77■□□□□ 0.6
CPSF4-205ENST00000440514 AIPL1Q9NZN9 384 aa18.77■□□□□ 0.6
CPSF4-205ENST00000440514 ANTXRLA6NF34 631 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 TRIM24O15164 1050 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 CACNG3O60359 315 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 TSPAN3O60637 253 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 RNF40O75150 1001 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 TULP3O75386 442 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 GJB6O95452 261 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 SKILP12757 684 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 TFE3P19532 575 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-205ENST00000440514 CHKAP35790 457 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 FLT3P36888 993 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 EIF2DP41214 584 aaKnown RBP18.76■□□□□ 0.59
CPSF4-205ENST00000440514 PRKCIP41743 596 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 CDK17Q00537 523 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 ANGPT1Q15389 498 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 ZC3H12AQ5D1E8 599 aaKnown RBP18.76■□□□□ 0.59
CPSF4-205ENST00000440514 FYB2Q5VWT5 728 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 NADSYN1Q6IA69 706 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 TRNP1Q6NT89 227 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 ZNF571Q7Z3V5 609 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-205ENST00000440514 PHF13Q86YI8 300 aaPredicted RBP18.76■□□□□ 0.59
CPSF4-205ENST00000440514 CPXM2Q8N436 756 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 PNKPQ96T60 521 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 ARHGEF4Q9NR80 690 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 DNAJC17Q9NVM6 304 aaKnown RBP18.76■□□□□ 0.59
CPSF4-205ENST00000440514 DDIT4Q9NX09 232 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 WDR35Q9P2L0 1181 aa18.76■□□□□ 0.59
CPSF4-205ENST00000440514 GOLGA6L7A0A1B0GV03 622 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-205ENST00000440514 H0Y858 1186 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 AP5Z1O43299 807 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 LATS1O95835 1130 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 PENKP01210 267 aaPredicted RBP18.75■□□□□ 0.59
CPSF4-205ENST00000440514 TNFAIP3P21580 790 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 SLC6A4P31645 630 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 NOS2P35228 1153 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 MATKP42679 507 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 SULT1E1P49888 294 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 SGSHP51688 502 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 SEC13P55735 322 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 KLHL30Q0D2K2 578 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 NME3Q13232 169 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 FAM133BQ5BKY9 247 aaKnown RBP18.75■□□□□ 0.59
CPSF4-205ENST00000440514 RFWD3Q6PCD5 774 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 MON1BQ7L1V2 547 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 C1orf210Q8IVY1 113 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 UNC45BQ8IWX7 931 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 EMC1Q8N766 993 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 PRRX2Q99811 253 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 RBSNQ9H1K0 784 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 KCNH6Q9H252 994 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 C2orf42Q9NWW7 574 aa18.75■□□□□ 0.59
CPSF4-205ENST00000440514 TAS2R14Q9NYV8 317 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms