RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 ADAM33Q9BZ11 813 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 DHX35Q9H5Z1 703 aaKnown RBP8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 ARHGEF3Q9NR81 526 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 GPATCH2LQ9NWQ4 482 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 DTLQ9NZJ0 730 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 IGSF9Q9P2J2 1179 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CPA4Q9UI42 421 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CDH9Q9ULB4 789 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 CHMP2BQ9UQN3 213 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 IKBKGQ9Y6K9 419 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 DOCK3Q8IZD9 2030 aa8.49□□□□□ -1.05
SPIRE1-204ENST00000440472 FOXO6A8MYZ6 492 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 IGF2BP3O00425 579 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CHUKO15111 745 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 NCAM2O15394 837 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 SPAG7O75391 227 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 BANF1O75531 89 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 STK10O94804 968 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ATP5BP06576 529 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PDGFRBP09619 1106 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ADORA2BP29275 332 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TKTP29401 623 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ZNF33AQ06730 810 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 SEMA3BQ13214 749 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PTK7Q13308 1070 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 DPYSQ14117 519 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 KBTBD12Q3ZCT8 623 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 GLRA4Q5JXX5 417 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 FAM91A1Q658Y4 838 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 HEATR6Q6AI08 1181 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 LRRC8BQ6P9F7 803 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 LVRNQ6Q4G3 990 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 KCNT2Q6UVM3 1135 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ZNF534Q76KX8 674 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 DEFB106AQ8N104 65 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 C4orf33Q8N1A6 199 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 AGGF1Q8N302 714 aaeCLIP8.48□□□□□ -1.053e-8■■■■■ 40
SPIRE1-204ENST00000440472 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 GSDMBQ8TAX9 411 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ACMSDQ8TDX5 336 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 C10orf82Q8WW14 230 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 HTR3CQ8WXA8 447 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 WNT8BQ93098 351 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TTC17Q96AE7 1141 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TMEM237Q96Q45 408 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TUBB6Q9BUF5 446 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PLAC1Q9HBJ0 212 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ARHGEF4Q9NR80 690 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TXLNGQ9NUQ3 528 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 MOCS1Q9NZB8 636 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ZC3H7BQ9UGR2 993 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 GRID1Q9ULK0 1009 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 RPL26L1Q9UNX3 145 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PCDHA11Q9Y5I1 949 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 HEY1Q9Y5J3 304 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 M0QZ92 97 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PIK3R2O00459 728 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 DLL1O00548 723 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 INPPL1O15357 1258 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 MTSS1O43312 755 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 KRT38O76015 456 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 F9P00740 461 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CYP11A1P05108 521 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 FAM200BP0CF97 657 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 LCP1P13796 627 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 NQO1P15559 274 aaKnown RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TFE3P19532 575 aaPredicted RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 RAB27AP51159 221 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 YWHAGP61981 247 aaKnown RBP eCLIP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ELF3P78545 371 aaPredicted RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 GBE1Q04446 702 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 MGAT3Q09327 533 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 SETDB1Q15047 1291 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TAF1CQ15572 869 aaPredicted RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 PARP6Q2NL67 630 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ARMC3Q5W041 872 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CST9Q5W186 159 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CLEC20AQ6ZU45 233 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ECHDC2Q86YB7 292 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 KLHDC8BQ8IXV7 354 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 FITM2Q8N6M3 262 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CCDC185Q8N715 623 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CLEC4CQ8WTT0 213 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 INPP5DQ92835 1189 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TRIM62Q9BVG3 475 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 SENP6Q9GZR1 1112 aaPredicted RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 TSPYL2Q9H2G4 693 aaPredicted RBP8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 KIF9Q9HAQ2 790 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 LRRC4Q9HBW1 653 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 CSNK1G1Q9HCP0 422 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 SAR1AQ9NR31 198 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 GINS2Q9Y248 185 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 SQORQ9Y6N5 450 aa8.48□□□□□ -1.05
SPIRE1-204ENST00000440472 ARHGEF37A1IGU5 675 aa8.47□□□□□ -1.05
SPIRE1-204ENST00000440472 ERI2A8K979 691 aaKnown RBP8.47□□□□□ -1.05
SPIRE1-204ENST00000440472 TRAFD1O14545 582 aaPredicted RBP8.47□□□□□ -1.05
SPIRE1-204ENST00000440472 DCLK1O15075 740 aa8.47□□□□□ -1.05
SPIRE1-204ENST00000440472 DNAJC6O75061 913 aa8.47□□□□□ -1.05
SPIRE1-204ENST00000440472 UNC5CO95185 931 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms