RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 CA9Q16790 459 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 CYP4V2Q6ZWL3 525 aaPredicted RBP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 SLC26A9Q7LBE3 791 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 ZBED8Q8IZ13 594 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 FAM13CQ8NE31 585 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 RNF157Q96PX1 679 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 ADAM2Q99965 735 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 DUSP16Q9BY84 665 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 KRT82Q9NSB4 513 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 CPSF2Q9P2I0 782 aaKnown RBP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 DPYSL4O14531 572 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 APOL1O14791 398 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 BEST1O76090 585 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 PAPOLAP51003 745 aaKnown RBP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 MORF4L2Q15014 288 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 PDK2Q15119 407 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 RNF180Q86T96 592 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 SRRM1Q8IYB3 904 aaKnown RBP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 HSFY1Q96LI6 401 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 NUDCD1Q96RS6 583 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 CCDC77Q9BR77 488 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 FRMD8P1Q9BZ68 369 aaPredicted RBP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 VPS37BQ9H9H4 285 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 PAPOLBQ9NRJ5 636 aaKnown RBP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 NKIRAS1Q9NYS0 192 aa14.67□□□□□ -0.06
LIMD1-202ENST00000440097 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.67□□□□□ -0.06
LIMD1-202ENST00000440097 H0Y3Z8 333 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 XPO1O14980 1071 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 FAM200BP0CF97 657 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 PDIA2Q13087 525 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 TAZQ16635 292 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 EFHC1Q5JVL4 640 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 ARHGEF18Q6ZSZ5 1173 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 CEP128Q6ZU80 1094 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 FAM131BQ86XD5 332 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 AGGF1Q8N302 714 aaeCLIP14.66□□□□□ -0.062e-10■■■■□ 20.9
LIMD1-202ENST00000440097 C3orf58Q8NDZ4 430 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 RAET1EQ8TD07 263 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 LRRN4Q8WUT4 740 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 MRRFQ96E11 262 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 HNRNPABQ99729 332 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 PAIP2Q9BPZ3 127 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 SYT15Q9BQS2 421 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 GIT1Q9Y2X7 761 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 E7ENQ6 273 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 MGEA5O60502 916 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 NDUFV1P49821 464 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 SULT1E1P49888 294 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 MRPS35P82673 323 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 FASTKD3Q14CZ7 662 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 SETDB1Q15047 1291 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 CWF19L1Q69YN2 538 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 CENPUQ71F23 418 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 LONP2Q86WA8 852 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 DEFB106AQ8N104 65 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 CCDC33Q8N5R6 958 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 PIDD1Q9HB75 910 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 AP4E1Q9UPM8 1137 aa14.66□□□□□ -0.06
LIMD1-202ENST00000440097 PDCD11Q14690 1871 aaKnown RBP14.66□□□□□ -0.06
LIMD1-202ENST00000440097 CAPN9O14815 690 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 RPL22P35268 128 aaKnown RBP14.65□□□□□ -0.06
LIMD1-202ENST00000440097 MGAT3Q09327 533 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 NME3Q13232 169 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 HIF1AQ16665 826 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 RNASEH2BQ5TBB1 312 aaKnown RBP14.65□□□□□ -0.06
LIMD1-202ENST00000440097 ANKMY2Q8IV38 441 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 ZNF784Q8NCA9 323 aaPredicted RBP14.65□□□□□ -0.06
LIMD1-202ENST00000440097 TTC8Q8TAM2 541 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 CD99L2Q8TCZ2 262 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 TEKT4Q8WW24 435 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 GRAMD1AQ96CP6 724 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 CAPNS2Q96L46 248 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 TBCBQ99426 244 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 CHKBQ9Y259 395 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 KCNN4O15554 427 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 BANF1O75531 89 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 RPLP2P05387 115 aaKnown RBP14.65□□□□□ -0.06
LIMD1-202ENST00000440097 LHX1P48742 406 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 TKTL1P51854 596 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 PCGF5Q86SE9 256 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 GLT1D1Q96MS3 346 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 MAGEB5Q9BZ81 275 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 SHOC2Q9UQ13 582 aa14.65□□□□□ -0.06
LIMD1-202ENST00000440097 MYBPHLA2RUH7 354 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 ATP5HO75947 161 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 EPHB2P29323 1055 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 PTPN9P43378 593 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 PTDSS1P48651 473 aaKnown RBP14.64□□□□□ -0.07
LIMD1-202ENST00000440097 YWHAZP63104 245 aaKnown RBP14.64□□□□□ -0.07
LIMD1-202ENST00000440097 GAD2Q05329 585 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 LPIN1Q14693 890 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 DEFB115Q30KQ5 88 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 KIAA0319Q5VV43 1072 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 TMEM154Q6P9G4 183 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 ZNF449Q6P9G9 518 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 CLEC20AQ6ZU45 233 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 PPIL6Q8IXY8 311 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 PLD5Q8N7P1 536 aa14.64□□□□□ -0.07
LIMD1-202ENST00000440097 PCDH19Q8TAB3 1148 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms