RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 ZNF358Q9NW07 568 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 NDUFA13Q9P0J0 144 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 TMCO1Q9UM00 188 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 ATP9BO43861 1147 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 GLRA3O75311 464 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 ATP6V1G1O75348 118 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 SERPINE1P05121 402 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 FAM58BPP0C7Q3 252 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 COX4I1P13073 169 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 SERPINB9P50453 376 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 MRPS5P82675 430 aaKnown RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 LSAMPQ13449 338 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 POTEAQ6S8J7 498 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 PQLC1Q8N2U9 271 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 LRRC43Q8N309 656 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.33□□□□□ -0.92
COPB1-202ENST00000439561 BHLHE22Q8NFJ8 381 aaPredicted RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 ATG4CQ96DT6 458 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 FBXL18Q96ME1 805 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 CATSPER2Q96P56 530 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 PXMP2Q9NR77 195 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 TEX264Q9Y6I9 313 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 TPST1O60507 370 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 ASLP04424 464 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 ERVK-10P10266 1014 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 CPA3P15088 417 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 HOXA10P31260 410 aaPredicted RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 C16orf72Q14CZ0 275 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 GEN1Q17RS7 908 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 CCDC14Q49A88 953 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 RAB6CQ53S08 254 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 FAM47CQ5HY64 1035 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 LRRC8BQ6P9F7 803 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 KLHDC10Q6PID8 442 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 BNC2Q6ZN30 1099 aaPredicted RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 RTKN2Q8IZC4 609 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 MOCOSQ96EN8 888 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 SIKE1Q9BRV8 207 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 RAB6CQ9H0N0 254 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 RPAP3Q9H6T3 665 aaPredicted RBP9.33□□□□□ -0.92
COPB1-202ENST00000439561 BTBD7Q9P203 1132 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 SHANK3Q9BYB0 1731 aa9.33□□□□□ -0.92
COPB1-202ENST00000439561 GOLGA8TH3BQL2 631 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 USP12O75317 370 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 TNFAIP8O95379 198 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ERBB2P04626 1255 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 PSMC3P17980 439 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 EPHA3P29320 983 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ESRRGP62508 458 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CCNIQ14094 377 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 TMEM259Q4ZIN3 620 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 FBXW8Q8N3Y1 598 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 KLHL23Q8NBE8 558 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 SGF29Q96ES7 293 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 FAM210AQ96ND0 272 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CCDC106Q9BWC9 280 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 TCF7L2Q9NQB0 619 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 GTSE1Q9NYZ3 720 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ZNF70Q9UC06 446 aaPredicted RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 TLK1Q9UKI8 766 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 SNX13Q9Y5W8 968 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 RPS6KL1Q9Y6S9 549 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CAPN14A8MX76 684 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CHADO15335 359 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 MAGEB3O15480 346 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 STRNO43815 780 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 RFPL1O75677 317 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 TRUB2O95900 331 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 MT-CO1P00395 513 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 EIF4BP23588 611 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 MGAT1P26572 445 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 GRIA2P42262 883 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 SERPINB8P50452 374 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 LPCAT2Q7L5N7 544 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CDKL3Q8IVW4 592 aaPredicted RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 KIAA0319LQ8IZA0 1049 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 TMEM130Q8N3G9 435 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ZNF276Q8N554 614 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 NSUN6Q8TEA1 469 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 ZNF669Q96BR6 464 aaPredicted RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 IFT43Q96FT9 208 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 LENG8Q96PV6 779 aaPredicted RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 APOL2Q9BQE5 337 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 MRPL4Q9BYD3 311 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 RPF1Q9H9Y2 349 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 XPNPEP3Q9NQH7 507 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 FETUBQ9UGM5 382 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 GNEQ9Y223 722 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 PHLPP1O60346 1717 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ASS1P00966 412 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 AMHP03971 560 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 ITGB3P05106 788 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 PABPC4LP0CB38 370 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 DHRS4L1P0CG22 281 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 IDH3AP50213 366 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 MAPK10P53779 464 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 DCTN2Q13561 401 aaKnown RBP9.32□□□□□ -0.92
COPB1-202ENST00000439561 TLR1Q15399 786 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 PPM1LQ5SGD2 360 aa9.32□□□□□ -0.92
COPB1-202ENST00000439561 CYP2R1Q6VVX0 501 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms