RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 IFT122Q9HBG6 1241 aa16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 STX18Q9P2W9 335 aaKnown RBP16.97■□□□□ 0.31
CLCNKA-203ENST00000439316 EVPLQ92817 2033 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 A8MXQ7 604 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 MDM4O15151 490 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 CA12O43570 354 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 HBP1O60381 514 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 MAGEC1O60732 1142 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 SNNO75324 88 aaPredicted RBP16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 C22orf31O95567 290 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 SMPD1P17405 629 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 CYP2B6P20813 491 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 PHKA2P46019 1235 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 SESN3P58005 492 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 GRIK3Q13003 919 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 CHI3L2Q15782 390 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 CA9Q16790 459 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 SLC10A6Q3KNW5 377 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 CDKL3Q8IVW4 592 aaPredicted RBP16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 TTC39CQ8N584 583 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 GSDMBQ8TAX9 411 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 CCDC110Q8TBZ0 833 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 FAM172AQ8WUF8 416 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 AFG1LQ8WV93 481 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 SIGLEC10Q96LC7 697 aa16.96■□□□□ 0.31
CLCNKA-203ENST00000439316 HMX2A2RU54 273 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TNPO2O14787 897 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 CAPN9O14815 690 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TBX10O75333 385 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TPSB2P20231 275 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 CTGFP29279 349 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 CRHR1P34998 444 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PGM1P36871 562 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 KLC1Q07866 573 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 LBRQ14739 615 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TMEM132DQ14C87 1099 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TPSAB1Q15661 275 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 CCL14Q16627 93 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 GOLGA7BQ2TAP0 167 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 DUSP28Q4G0W2 176 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 SCYL2Q6P3W7 929 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 LRRC74BQ6ZQY2 392 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 ARID3BQ8IVW6 561 aaPredicted RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PPTC7Q8NI37 304 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 EMID1Q96A84 441 aaPredicted RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 ACAP3Q96P50 834 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 NT5C1AQ9BXI3 368 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 NGRNQ9NPE2 291 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 ITGA11Q9UKX5 1188 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 LRCH1Q9Y2L9 728 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 CCDC195A0A1B0GUA6 201 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 CCDC189A1A4V9 331 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 EIF4E1BA6NMX2 242 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 BIRC5O15392 142 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 ADCY6O43306 1168 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 MAP3K6O95382 1288 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 ATP5BP06576 529 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PDHA1P08559 390 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 SDC4P31431 198 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 RGS7P49802 495 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 SERPINB9P50453 376 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 POU5F1BQ06416 359 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 STILQ15468 1287 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PKDCCQ504Y2 493 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 IRGCQ6NXR0 463 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TRMT10BQ6PF06 316 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 IFNLR1Q8IU57 520 aaPredicted RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 TMPRSS6Q8IU80 811 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 NUDCD3Q8IVD9 361 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PDCD7Q8N8D1 485 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 KHSRPQ92945 711 aaKnown RBP eCLIP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 STMN2Q93045 179 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 EBNA1BP2Q99848 306 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 SLC13A1Q9BZW2 595 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PCMTD2Q9NV79 361 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PPARGC1AQ9UBK2 798 aaKnown RBP16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 GJD2Q9UKL4 321 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 PLA2G4CQ9UP65 541 aa16.95■□□□□ 0.3
CLCNKA-203ENST00000439316 DPPA5A6NC42 116 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 B2RBV5 119 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 F8W8V4 182 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 CYB561D2O14569 222 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 AOC2O75106 756 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 GCATO75600 419 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 METTL18O95568 372 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 LGALS2P05162 132 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 BPGMP07738 259 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 CPA2P48052 419 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 RBP5P82980 135 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 AP1B1Q10567 949 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 IQSEC1Q6DN90 963 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 TIFABQ6ZNK6 161 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 APLFQ8IW19 511 aaPredicted RBP16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 SLC4A5Q9BY07 1137 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 RNPEPQ9H4A4 650 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 NRDE2Q9H7Z3 1164 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 ZNF395Q9H8N7 513 aaPredicted RBP16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 ERAP1Q9NZ08 941 aa16.94■□□□□ 0.3
CLCNKA-203ENST00000439316 ZNF212Q9UDV6 495 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms