RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 LMAN2Q12907 356 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 STILQ15468 1287 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 TRIM61Q5EBN2 209 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 BSPRYQ5W0U4 402 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 KIAA1211LQ6NV74 962 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 LCLAT1Q6UWP7 414 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 ANKS1BQ7Z6G8 1248 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 CPXM2Q8N436 756 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 UBR7Q8N806 425 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 KCTD13Q8WZ19 329 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 GOLGA1Q92805 767 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 CNTNAP3BQ96NU0 1288 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 CNTNAP3Q9BZ76 1288 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 CNGB3Q9NQW8 809 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 EVLQ9UI08 416 aaPredicted RBP19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 FBXO10Q9UK96 956 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 CYP8B1Q9UNU6 501 aa19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 HBS1LQ9Y450 684 aaKnown RBP19.29■□□□□ 0.68
AC004540.1-201ENST00000439120 LAMA1P25391 3075 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 ATXN2Q99700 1313 aaKnown RBP19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 YJEFN3A6XGL0 299 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 PPP1R3GB7ZBB8 358 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 E7ENQ6 273 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 M0QYV0 167 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 NPC1O15118 1278 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 RGS7P49802 495 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 STX17P56962 302 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 IRX4P78413 519 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 PAK1Q13153 545 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 MORC3Q14149 939 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 FOXR2Q6PJQ5 311 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 KIAA1324Q6UXG2 1013 aaKnown RBP19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 DEFB119Q8N690 84 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 SLC2A11Q9BYW1 496 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 CIPCQ9C0C6 399 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 SFMBT1Q9UHJ3 866 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 STON1Q9Y6Q2 735 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 SPTBN2O15020 2390 aa19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 TNRC6BQ9UPQ9 1833 aaKnown RBP19.28■□□□□ 0.68
AC004540.1-201ENST00000439120 SYNCRIPO60506 623 aaKnown RBP19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 NDUFS2O75306 463 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 KCNK5O95279 499 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 FGFR1OPO95684 399 aaKnown RBP19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 CFIP05156 583 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 ITPKAP23677 461 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 DAOAP59103 153 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 ZNF445P59923 1031 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 TRIP4Q15650 581 aaPredicted RBP19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 CNGA2Q16280 664 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 GEN1Q17RS7 908 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 UAP1L1Q3KQV9 507 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 MPPE1Q53F39 396 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 PSAPL1Q6NUJ1 521 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 RRAGAQ7L523 313 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 BHLHA9Q7RTU4 235 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 RBBP8NLQ8NC74 664 aaPredicted RBP19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 TFAP2BQ92481 460 aa19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.27■□□□□ 0.68
AC004540.1-201ENST00000439120 CEP192Q8TEP8 1941 aa19.27■□□□□ 0.67
AC004540.1-201ENST00000439120 IGHV1OR15-9A0A0B4J2B8 117 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 WASH3PC4AMC7 463 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 PIK3R2O00459 728 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 TSPAN3O60637 253 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 GADD45BO75293 160 aaPredicted RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 AFPP02771 609 aaKnown RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 BMP6P22004 513 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 BRD2P25440 801 aaKnown RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 HOXD12P35452 270 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 NOVA1P51513 510 aaKnown RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 ATXN3P54252 364 aaPredicted RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 GCNT1Q02742 428 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 KCNH2Q12809 1159 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 EIF4HQ15056 248 aaKnown RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 PKDCCQ504Y2 493 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 N4BP2L1Q5TBK1 243 aaPredicted RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 RABEPKQ7Z6M1 372 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 FAM217AQ8IXS0 508 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 SCML4Q8N228 414 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 CEP76Q8TAP6 659 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 IRGQQ8WZA9 623 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 KAT5Q92993 513 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 MRGPRX1Q96LB2 322 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 SRRTQ9BXP5 876 aaKnown RBP19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 TMEM74BQ9NUR3 256 aa19.26■□□□□ 0.67
AC004540.1-201ENST00000439120 MSI1O43347 362 aaKnown RBP19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 KRT5P13647 590 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 MAPK8P45983 427 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 ZNF132P52740 706 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 ZNF33AQ06730 810 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 PMF1Q6P1K2 205 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 ARHGEF19Q8IW93 802 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 TRIM59Q8IWR1 403 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 EHBP1Q8NDI1 1231 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 SLC35F5Q8WV83 523 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 P2RY11Q96G91 374 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 PIWIL1Q96J94 861 aaKnown RBP19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 SLC6A17Q9H1V8 727 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 PRDM16Q9HAZ2 1276 aa19.25■□□□□ 0.67
AC004540.1-201ENST00000439120 CD248Q9HCU0 757 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms