RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SLC39A13Q96H72 371 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 ZNF668Q96K58 619 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 SNX22Q96L94 193 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 CCDC17Q96LX7 622 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 UNKQ9C0B0 810 aaKnown RBP3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 NRIP3Q9NQ35 241 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 SEMA5BQ9P283 1151 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 NKX1-2Q9UD57 310 aaPredicted RBP3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 TAGLN3Q9UI15 199 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 VPS51Q9UID3 782 aa3.93□□□□□ -1.78
HMGB3P12-201ENST00000438745 COL16A1Q07092 1604 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 COL15A1P39059 1388 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 RASA4BC9J798 803 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 RAB27BO00194 218 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 APOL1O14791 398 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 RASA4O43374 803 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 PIAS2O75928 621 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 USP1O94782 785 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 CREB1P16220 341 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 TSHRP16473 764 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 TPH1P17752 444 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 ABCB4P21439 1286 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 IL1R2P27930 398 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 MCM5P33992 734 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 TM4SF4P48230 202 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 CARSP49589 748 aaKnown RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 PGDP52209 483 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 CFHR3Q02985 330 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 PMS2P11Q13670 270 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 TRIP6Q15654 476 aaKnown RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 CERKLQ49MI3 558 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 C10orf62Q5T681 223 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 HIBCHQ6NVY1 386 aaPredicted RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 C1orf228Q6PIY5 440 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 TXLNBQ8N3L3 684 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 SAMD3Q8N6K7 520 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 METTL25Q8N6Q8 603 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 LRRC46Q96FV0 321 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 SGCZQ96LD1 299 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 FAM227BQ96M60 508 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 MMS19Q96T76 1030 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 BRIP1Q9BX63 1249 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 ZNF700Q9H0M5 742 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 CERS4Q9HA82 394 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 AS3MTQ9HBK9 375 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 PDGFCQ9NRA1 345 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 LPAR3Q9UBY5 353 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 RIMKLBQ9ULI2 386 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 SCAF8Q9UPN6 1271 aaKnown RBP3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 PCDHGB2Q9Y5G2 931 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 ABCA6Q8N139 1617 aa3.92□□□□□ -1.78
HMGB3P12-201ENST00000438745 STRCP1A6NGW2 1772 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 E5RJQ4 531 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 RTEL1-TNFRSF6BF6WH68 1400 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 FOXN3O00409 490 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 AREL1O15033 823 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 TMPRSS11DO60235 418 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 LDHAP00338 332 aaKnown RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 HARSP12081 509 aaKnown RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 ATP5F1P24539 256 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 COPAP53621 1224 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 CLCA4Q14CN2 919 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 LARS2Q15031 903 aaKnown RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 DENND2CQ68D51 928 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 MZT2AQ6P582 158 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 SERPINA13PQ6UXR4 307 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 RNF44Q7L0R7 432 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 KRT28Q7Z3Y7 464 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 OR2C3Q8N628 320 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 C12orf76Q8N812 135 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 ATP11CQ8NB49 1132 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 SMCR8Q8TEV9 937 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 IPCEF1Q8WWN9 437 aaPredicted RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 COQ8BQ96D53 544 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 IQCDQ96DY2 449 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 EDC3Q96F86 508 aaKnown RBP3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 STARD7Q9NQZ5 370 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 SNX15Q9NRS6 342 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 UGGT1Q9NYU2 1555 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 ZNF212Q9UDV6 495 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 CDC23Q9UJX2 597 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 CEP83Q9Y592 693 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 DEPDC5O75140 1603 aa3.91□□□□□ -1.78
HMGB3P12-201ENST00000438745 CLTCQ00610 1675 aaKnown RBP3.9□□□□□ -1.78
HMGB3P12-201ENST00000438745 ITSN2Q9NZM3 1697 aa3.9□□□□□ -1.78
HMGB3P12-201ENST00000438745 KCNQ3O43525 872 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 ANXA2P07355 339 aaKnown RBP3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 HTR7P34969 479 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 PTGER1P34995 402 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 COPB1P53618 953 aaKnown RBP3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 DEUP1Q05D60 604 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 KCNAB1Q14722 419 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 ETFDHQ16134 617 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 ARL13BQ3SXY8 428 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 MIS18BP1Q6P0N0 1132 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 SLC2A7Q6PXP3 512 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 DPP9Q86TI2 863 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 SPICE1Q8N0Z3 855 aa3.9□□□□□ -1.79
HMGB3P12-201ENST00000438745 RNF152Q8N8N0 203 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms