RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 SLC6A14Q9UN76 642 aa19.04■□□□□ 0.64
GTF3A-204ENST00000438571 CETN3O15182 167 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 MAOBP27338 520 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 FAM193AP78312 1265 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 SEMA3BQ13214 749 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 TMEM215Q68D42 235 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 PIP4P1Q86T03 277 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 TADA2BQ86TJ2 420 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 ZC3H3Q8IXZ2 948 aaKnown RBP19.03■□□□□ 0.64
GTF3A-204ENST00000438571 FMR1NBQ8N0W7 255 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-204ENST00000438571 MINDY1Q8N5J2 469 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 ANKRD52Q8NB46 1076 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 RBBP8NLQ8NC74 664 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-204ENST00000438571 PIWIL1Q96J94 861 aaKnown RBP19.03■□□□□ 0.64
GTF3A-204ENST00000438571 ADAM33Q9BZ11 813 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 THAP10Q9P2Z0 257 aaPredicted RBP19.03■□□□□ 0.64
GTF3A-204ENST00000438571 SLC27A6Q9Y2P4 619 aa19.03■□□□□ 0.64
GTF3A-204ENST00000438571 KCNJ18B7U540 433 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 GFRA2O00451 464 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 ZNF217O75362 1048 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 PROS1P07225 676 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 SERPINF2P08697 491 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 PRKCHP24723 683 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 HOXD12P35452 270 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 COG7P83436 770 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 LRMPQ12912 555 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 ANKRD40Q6AI12 368 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 RSRC2Q7L4I2 434 aaKnown RBP19.02■□□□□ 0.64
GTF3A-204ENST00000438571 UBR7Q8N806 425 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 UBA3Q8TBC4 463 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 SCNM1Q9BWG6 230 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 SFMBT1Q9UHJ3 866 aa19.02■□□□□ 0.64
GTF3A-204ENST00000438571 HYAL3O43820 417 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-204ENST00000438571 ZBED1O96006 694 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 CALCAP01258 141 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 DPP6P42658 865 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 ADIGQ0VDE8 80 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 CUL2Q13617 745 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 ENPP2Q13822 863 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 ZNF234Q14588 700 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 PM20D1Q6GTS8 502 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 FAM217AQ8IXS0 508 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 RGL4Q8IZJ4 473 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 CPXM2Q8N436 756 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 EDEM1Q92611 657 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 ZNF419Q96HQ0 510 aaPredicted RBP19.01■□□□□ 0.63
GTF3A-204ENST00000438571 FAXDC2Q96IV6 333 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 CDK5RAP1Q96SZ6 601 aaKnown RBP19.01■□□□□ 0.63
GTF3A-204ENST00000438571 UBXN6Q9BZV1 441 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 DCLK3Q9C098 648 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 USP36Q9P275 1121 aaKnown RBP19.01■□□□□ 0.63
GTF3A-204ENST00000438571 ZNF510Q9Y2H8 683 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 COQ4Q9Y3A0 265 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 KNL1Q8NG31 2342 aa19.01■□□□□ 0.63
GTF3A-204ENST00000438571 YJEFN3A6XGL0 299 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 E7ENQ6 273 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 XPO1O14980 1071 aaKnown RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 MSI1O43347 362 aaKnown RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 TSPAN3O60637 253 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 GABBR2O75899 941 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 CD19P15391 556 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 CHKAP35790 457 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 SGSHP51688 502 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 COPAP53621 1224 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 ATXN3P54252 364 aaPredicted RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 BCAT1P54687 386 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 GFPT1Q06210 699 aaPredicted RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 ZNF658Q5TYW1 1059 aaPredicted RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 ANKS1BQ7Z6G8 1248 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 FMNL3Q8IVF7 1028 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 CEP76Q8TAP6 659 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 DDI1Q8WTU0 396 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 SLC35C1Q96A29 364 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 TOE1Q96GM8 510 aaKnown RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 PRDM16Q9HAZ2 1276 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 WSB2Q9NYS7 404 aaPredicted RBP19■□□□□ 0.63
GTF3A-204ENST00000438571 STRIP2Q9ULQ0 834 aa19■□□□□ 0.63
GTF3A-204ENST00000438571 PIK3R2O00459 728 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 ARHGAP33O14559 1287 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 SLC16A3O15427 465 aaKnown RBP18.99■□□□□ 0.63
GTF3A-204ENST00000438571 ZBTB24O43167 697 aaPredicted RBP18.99■□□□□ 0.63
GTF3A-204ENST00000438571 STX10O60499 249 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 NDUFS2O75306 463 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 HLA-EP13747 358 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 CD59P13987 128 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 HOXD9P28356 352 aaPredicted RBP18.99■□□□□ 0.63
GTF3A-204ENST00000438571 CD6P30203 668 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 BST2Q10589 180 aaKnown RBP18.99■□□□□ 0.63
GTF3A-204ENST00000438571 STARD3Q14849 445 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 TRIP4Q15650 581 aaPredicted RBP18.99■□□□□ 0.63
GTF3A-204ENST00000438571 SGO2Q562F6 1265 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 ARHGAP18Q8N392 663 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 TTC39CQ8N584 583 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 ZNF366Q8N895 744 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 ENGASEQ8NFI3 743 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 TFAP2BQ92481 460 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 GATA6Q92908 595 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 KAT5Q92993 513 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 PLD4Q96BZ4 506 aa18.99■□□□□ 0.63
GTF3A-204ENST00000438571 CAMK1GQ96NX5 476 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 131.7 ms