RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 VANGL2Q9ULK5 521 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 RUVBL2Q9Y230 463 aaKnown RBP6.88□□□□□ -1.31
CSDE1-205ENST00000438362 ACOT9Q9Y305 439 aa6.88□□□□□ -1.31
CSDE1-205ENST00000438362 RNF103O00237 685 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 AHCYL1O43865 530 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SNX2O60749 519 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 MAFO75444 373 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SEC24DO94855 1032 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CYP2C9P11712 490 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 INSRRP14616 1297 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ENPEPQ07075 957 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NSUN2Q08J23 767 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TCEAL1Q15170 157 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 GRTP1Q5TC63 336 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ANKRD22Q5VYY1 191 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 IYDQ6PHW0 289 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SIAH1Q8IUQ4 282 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 FNIP1Q8TF40 1166 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ZC3H15Q8WU90 426 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CLEC4DQ8WXI8 215 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 THAP11Q96EK4 314 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ZBTB18Q99592 522 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SNRNP25Q9BV90 132 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CAAP1Q9H8G2 361 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SNCAIPQ9Y6H5 919 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TUBGCP6Q96RT7 1819 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CICQ96RK0 1608 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 UBA6A0AVT1 1052 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 HACD1B0YJ81 288 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 KCNK1O00180 336 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 XPO1O14980 1071 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ANXA9O76027 345 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TGDSO95455 350 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NFICP08651 508 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ANPEPP15144 967 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 RAG1P15918 1043 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 STMN1P16949 149 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 MLH1P40692 756 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PDAP1Q13442 181 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NAB1Q13506 487 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NOMO1Q15155 1222 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 GSTA3Q16772 222 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ANO4Q32M45 955 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ZBTB41Q5SVQ8 909 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 FNBP1LQ5T0N5 605 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CES3Q6UWW8 571 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 IFNEQ86WN2 208 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ULK2Q8IYT8 1036 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 REPS2Q8NFH8 660 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ACMSDQ8TDX5 336 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CD101Q93033 1021 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NMD3Q96D46 503 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PPP1R2P1Q96PQ5 205 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 LHX5Q9H2C1 402 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 EBF2Q9HAK2 575 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 APOBEC3GQ9HC16 384 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 XPNPEP1Q9NQW7 623 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 IRAK4Q9NWZ3 460 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 KLK14Q9P0G3 267 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 RABGEF1Q9UJ41 708 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NUP98P52948 1817 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PKD1L3Q7Z443 1732 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NWD2Q9ULI1 1742 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 F8W8V4 182 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TPP1O14773 563 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 BIRC5O15392 142 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 DYNC1LI2O43237 492 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PMPCBO75439 489 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 JCHAINP01591 159 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 MPOP05164 745 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 HNRNPCP07910 306 aaKnown RBP eCLIP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SERPINA6P08185 405 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TPBGLP0DKB5 382 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PSMC3P17980 439 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PTPRAP18433 802 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 AVPR1AP37288 418 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ARPP19P56211 112 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 HDAC4P56524 1084 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 WASHC5Q12768 1159 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PRKAA1Q13131 559 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 DGKZQ13574 1117 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 PTK2BQ14289 1009 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 ADRM1Q16186 407 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 KIZQ2M2Z5 673 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 OLFML2BQ68BL8 750 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 FAM183BPQ6ZVS7 135 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 SKA2Q8WVK7 121 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 FAR2Q96K12 515 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CPXM1Q96SM3 734 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CPNE1Q99829 537 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 GPR88Q9GZN0 384 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 CDT1Q9H211 546 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 WDCPQ9H6R7 721 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 XPNPEP3Q9NQH7 507 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 NCKIPSDQ9NZQ3 722 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 STX18Q9P2W9 335 aaKnown RBP6.87□□□□□ -1.31
CSDE1-205ENST00000438362 TNFSF13BQ9Y275 285 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 MYH3P11055 1940 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 A0A0A0MRY4 1105 aa6.87□□□□□ -1.31
CSDE1-205ENST00000438362 RRN3P2A6NIE6 340 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms