RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 BCCIPQ9P287 314 aaKnown RBP eCLIP9□□□□□ -0.97
NIF3L1-208ENST00000436412 CPSF3Q9UKF6 684 aaKnown RBP9□□□□□ -0.97
NIF3L1-208ENST00000436412 ARHGAP26Q9UNA1 814 aa9□□□□□ -0.97
NIF3L1-208ENST00000436412 TNRC6BQ9UPQ9 1833 aaKnown RBP9□□□□□ -0.97
NIF3L1-208ENST00000436412 COL6A6A6NMZ7 2263 aa9□□□□□ -0.97
NIF3L1-208ENST00000436412 EIF4E1BA6NMX2 242 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 KPNA7A9QM74 516 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 SLC9A3R1O14745 358 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 TADA3O75528 432 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 APODP05090 189 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 SYPP08247 313 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 NFICP08651 508 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 HDCP19113 662 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 TNFRSF4P43489 277 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 GUCY1B3Q02153 619 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 RAD51AP2Q09MP3 1159 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 SCAPQ12770 1279 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 TRIP6Q15654 476 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 SV2CQ496J9 727 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 CFAP221Q4G0U5 840 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 HYIQ5T013 277 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 C19orf48Q6RUI8 117 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 DTHD1Q6ZMT9 781 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 KCNK18Q7Z418 384 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 TTC30AQ86WT1 665 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 NT5DC4Q86YG4 428 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 TMEM86AQ8N2M4 240 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 IL17RCQ8NAC3 791 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 TXNDC5Q8NBS9 432 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 FBXO18Q8NFZ0 1043 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 SPATA18Q8TC71 538 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 RLN3Q8WXF3 142 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 ADAMTS14Q8WXS8 1223 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 FUBP3Q96I24 572 aaKnown RBP eCLIP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 CEP295NLQ96MC4 621 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 ZNF560Q96MR9 790 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 SLC22A12Q96S37 553 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 CYP2S1Q96SQ9 504 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 PNKPQ96T60 521 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 KRTAP9-9Q9BYP9 154 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 KRTAP9-4Q9BYQ2 154 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 KCNF1Q9H3M0 494 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 CCDC86Q9H6F5 360 aaKnown RBP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 DPP3Q9NY33 737 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 MBD1Q9UIS9 605 aaPredicted RBP8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 ODF2LQ9ULJ1 636 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 CEP192Q8TEP8 1941 aa8.99□□□□□ -0.97
NIF3L1-208ENST00000436412 ADAMTS9Q9P2N4 1935 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 KLF8O95600 359 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 CTSBP07858 339 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 CD59P13987 128 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 HNRNPLP14866 589 aaKnown RBP eCLIP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 ITPKAP23677 461 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 MAP4P27816 1152 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 GRIA2P42262 883 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 MAGEA11P43364 429 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 GPR15P49685 360 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 CDR1P51861 262 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 SLC12A3P55017 1021 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 FAM193AP78312 1265 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 GSTM4Q03013 218 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 PCDH1Q08174 1060 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 DDR2Q16832 855 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 COL28A1Q2UY09 1125 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 PREPLQ4J6C6 727 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 SLFN12LQ6IEE8 588 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 CCNI2Q6ZMN8 369 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 ARMCX6Q7L4S7 300 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 TRMT11Q7Z4G4 463 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 ADGRG2Q8IZP9 1017 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 MINDY1Q8N5J2 469 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 ALLCQ8N6M5 410 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 ARL14EPQ8N8R7 260 aaPredicted RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 GLIS3Q8NEA6 775 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 MMTAG2Q9BU76 263 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 GTPBP2Q9BX10 602 aaKnown RBP8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 LIN7BQ9HAP6 207 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 TMLHEQ9NVH6 421 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 DKK4Q9UBT3 224 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 PTPN13Q12923 2485 aa8.98□□□□□ -0.97
NIF3L1-208ENST00000436412 MGAQ8IWI9 3026 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 A0A1W2PQD8 194 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 C2orf78A6NCI8 922 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PP2D1A8MPX8 630 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SGK1O00141 431 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 LEFTY2O00292 366 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 SLC26A4O43511 780 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 HUS1O60921 280 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 ZNF217O75362 1048 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 KAT7O95251 611 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 IL18RAPO95256 599 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 CYP17A1P05093 508 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 FTH1P19P0C7X4 201 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PLA2G4BP0C869 781 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 DRD2P14416 443 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 CYP2F1P24903 491 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PCSK1P29120 753 aa8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 KIR2DL1P43626 348 aaPredicted RBP8.97□□□□□ -0.97
NIF3L1-208ENST00000436412 PPP3CCP48454 512 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 260.7 ms