RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 HOXC11O43248 304 aaPredicted RBP11.02□□□□□ -0.65
CPNE1-214ENST00000435747 HCRTO43612 131 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 TPMTP51580 245 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 ASIC1P78348 528 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 AMPD3Q01432 767 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 ORC1Q13415 861 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 ILKQ13418 452 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 CCDC142Q17RM4 750 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 SOWAHAQ2M3V2 549 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 GRAMD4Q6IC98 578 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 LAYNQ6UX15 382 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 ADAT2Q7Z6V5 191 aaKnown RBP11.02□□□□□ -0.65
CPNE1-214ENST00000435747 DDX42Q86XP3 938 aaKnown RBP eCLIP11.02□□□□□ -0.65
CPNE1-214ENST00000435747 C12orf56Q8IXR9 622 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 LSMEM2Q8N112 164 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 TMEM174Q8WUU8 243 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 KBTBD7Q8WVZ9 684 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 ACBD6Q9BR61 282 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 NUP58Q9BVL2 599 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 BLZF1Q9H2G9 400 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 TM9SF3Q9HD45 589 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 ABCB6Q9NP58 842 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 TRPM5Q9NZQ8 1165 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 AGAP1Q9UPQ3 857 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 MAN2B2Q9Y2E5 1009 aa11.02□□□□□ -0.65
CPNE1-214ENST00000435747 A0A1B0GTQ1 180 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 GFRA2O00451 464 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 MPOP05164 745 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ITGAVP06756 1048 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 SLFN14P0C7P3 912 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ABCB4P21439 1286 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 GRIK1P39086 918 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 CTSKP43235 329 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ME1P48163 572 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ERVPABLB-1P60509 514 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 SNRPFP62306 86 aaKnown RBP11.01□□□□□ -0.65
CPNE1-214ENST00000435747 GABREP78334 506 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 TLE1Q04724 770 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 MAPK8IP2Q13387 824 aaPredicted RBP11.01□□□□□ -0.65
CPNE1-214ENST00000435747 SNRNP35Q16560 246 aaKnown RBP11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ANO4Q32M45 955 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 FUT11Q495W5 492 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
CPNE1-214ENST00000435747 FAM171BQ6P995 826 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 CCDC81Q6ZN84 652 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 STXBP4Q6ZWJ1 553 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 WDR49Q8IV35 697 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 SCN4BQ8IWT1 228 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 GRAMD1CQ8IYS0 662 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 TMEM86AQ8N2M4 240 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 CSGALNACT2Q8N6G5 542 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 EID2Q8N6I1 236 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 TOP6BLQ8N6T0 577 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 KIAA0895Q8NCT3 520 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 PLEKHO2Q8TD55 490 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 CACTINQ8WUQ7 758 aaKnown RBP11.01□□□□□ -0.65
CPNE1-214ENST00000435747 RFFLQ8WZ73 363 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 OTUB2Q96DC9 234 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 PSMG3-AS1Q96PY0 264 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ARHGAP9Q9BRR9 750 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 RNF38Q9H0F5 515 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 PCED1AQ9H1Q7 454 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 OSGEPQ9NPF4 335 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 CFAP45Q9UL16 551 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 NME7Q9Y5B8 376 aa11.01□□□□□ -0.65
CPNE1-214ENST00000435747 ZFHX3Q15911 3703 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 ZNF233A6NK53 670 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 WASH3PC4AMC7 463 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 DXOO77932 396 aaKnown RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 CST3P01034 146 aaPredicted RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 MBL2P11226 248 aaPredicted RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 ACADMP11310 421 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 PFKFB1P16118 471 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 CMA1P23946 247 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 C21orf59P57076 290 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 CLDN10P78369 228 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 RBP5P82980 135 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 INSM1Q01101 510 aaPredicted RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 CYP24A1Q07973 514 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 STK4Q13043 487 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 PSMD6Q15008 389 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 CFAP221Q4G0U5 840 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 XKR5Q6UX68 686 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 DPH6Q7L8W6 267 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 FAM124AQ86V42 546 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 ZNF516Q92618 1163 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 PRCCQ92733 491 aaPredicted RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 SIPA1Q96FS4 1042 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 PAGE5Q96GU1 130 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 LIN37Q96GY3 246 aaPredicted RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 VCPIP1Q96JH7 1222 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 MKRN2Q9H000 416 aaKnown RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 KIAA1586Q9HCI6 787 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 SLC39A2Q9NP94 309 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 THSD1Q9NS62 852 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 DNAJC17Q9NVM6 304 aaKnown RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 DMAC2Q9NW81 257 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 DDX43Q9NXZ2 648 aaKnown RBP11□□□□□ -0.65
CPNE1-214ENST00000435747 ADAMTS1Q9UHI8 967 aa11□□□□□ -0.65
CPNE1-214ENST00000435747 SERTAD1Q9UHV2 236 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms