RNA–Protein interactions for RNA: ENST00000434728.1

CDC42EP1-204, Transcript of CDC42 effector protein 1, humanhuman

TSL 4

Gene CDC42EP1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-204ENST00000434728 CISD3P0C7P0 127 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 ZSCAN22P10073 491 aaPredicted RBP14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 OXTRP30559 389 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 GCLMP48507 274 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 KIF11P52732 1056 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 ZNF132P52740 706 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 INCA1Q0VD86 236 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 ZNF394Q53GI3 561 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 SERPINA13PQ6UXR4 307 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 Q6ZNB5 142 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 INTS8Q75QN2 995 aaKnown RBP14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 CCDC186Q7Z3E2 898 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 RAB44Q7Z6P3 723 aaPredicted RBP14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 TMPRSS6Q8IU80 811 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 ARHGAP18Q8N392 663 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 PNPLA1Q8N8W4 532 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 DDI1Q8WTU0 396 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 HEXIM2Q96MH2 286 aaKnown RBP14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 TWNKQ96RR1 684 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 KCTD10Q9H3F6 313 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 CD248Q9HCU0 757 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 CLIC5Q9NZA1 410 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 SLC27A6Q9Y2P4 619 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 FREM2Q5SZK8 3169 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 ACACAQ13085 2346 aa14.06□□□□□ -0.16
CDC42EP1-204ENST00000434728 HHLA1C9JL84 531 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 F13A1P00488 732 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 TRIM49P0CI25 452 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 TRIM49CP0CI26 452 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 NR2F2P24468 414 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 MATKP42679 507 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 IL12RB1P42701 662 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 MFAP3P55082 362 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 ACAP1Q15027 740 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 GEN1Q17RS7 908 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 DCAF12L1Q5VU92 463 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 ATL3Q6DD88 541 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 IL27RAQ6UWB1 636 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 FAM124AQ86V42 546 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 DENND1CQ8IV53 801 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 FAM186BQ8IYM0 893 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 CADM4Q8NFZ8 388 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 PAGE5Q96GU1 130 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 NUP58Q9BVL2 599 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 DUSP16Q9BY84 665 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 MKRN2Q9H000 416 aaKnown RBP14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 GAREM1Q9H706 876 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 WSB2Q9NYS7 404 aaPredicted RBP14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 MARCH2Q9P0N8 246 aa14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 USP36Q9P275 1121 aaKnown RBP14.05□□□□□ -0.16
CDC42EP1-204ENST00000434728 SLC12A8A0AV02 714 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 BCAT2O15382 392 aaPredicted RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 KLRC4O43908 158 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 CILPO75339 1184 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 PENKP01210 267 aaPredicted RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 RPL13P26373 211 aaKnown RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 TPMTP51580 245 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 SCAPQ12770 1279 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 PKP1Q13835 747 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 ZNF234Q14588 700 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 EIF4HQ15056 248 aaKnown RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 FNDC3BQ53EP0 1204 aaKnown RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 PPP1R26Q5T8A7 1209 aaPredicted RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 SCD5Q86SK9 330 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 METTL3Q86U44 580 aaKnown RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 PROSER1Q86XN7 944 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 TAS1R2Q8TE23 839 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 ADAMTS14Q8WXS8 1223 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 CCDC86Q9H6F5 360 aaKnown RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 ITM2CQ9NQX7 267 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 ELOVL2Q9NXB9 296 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 THAP10Q9P2Z0 257 aaPredicted RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 USP25Q9UHP3 1055 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 EIF2B4Q9UI10 523 aaKnown RBP14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 NFE2L3Q9Y4A8 694 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 ITPR1Q14643 2758 aa14.04□□□□□ -0.16
CDC42EP1-204ENST00000434728 KNL1Q8NG31 2342 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 GOLGA8CPA6NN73 597 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 ACTN4O43707 911 aaKnown RBP14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 GJB3O75712 270 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 KLKB1P03952 638 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 MYL1P05976 194 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 HOXB3P14651 431 aaPredicted RBP14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 HARS2P49590 506 aaKnown RBP14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 YWHAGP61981 247 aaKnown RBP eCLIP14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 FYB2Q5VWT5 728 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 TTC39CQ8N584 583 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 RNF139Q8WU17 664 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 TMEM174Q8WUU8 243 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 DNASE2BQ8WZ79 361 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 APOBEC3GQ9HC16 384 aaKnown RBP14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 TM7SF3Q9NS93 570 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 LMBRD1Q9NUN5 540 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 FBXO10Q9UK96 956 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 AGO1Q9UL18 857 aaKnown RBP14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 PLA2G4CQ9UP65 541 aa14.03□□□□□ -0.16
CDC42EP1-204ENST00000434728 GOLGA4Q13439 2230 aaKnown RBP14.02□□□□□ -0.16
CDC42EP1-204ENST00000434728 A0A1B0GVL5 298 aa14.02□□□□□ -0.17
CDC42EP1-204ENST00000434728 FAM221BA6H8Z2 402 aa14.02□□□□□ -0.17
CDC42EP1-204ENST00000434728 METTL12A8MUP2 240 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms