RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 FBXO6Q9NRD1 293 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 DDX43Q9NXZ2 648 aaKnown RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 RANBP2P49792 3224 aaKnown RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 WDR27A2RRH5 827 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 PSEN2P49810 448 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 CLCNKBP51801 687 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 TKTL1P51854 596 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 SCN4BQ8IWT1 228 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 TTC13Q8NBP0 860 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 NKD2Q969F2 451 aaPredicted RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 DLGAP2Q9P1A6 1054 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 CDH23Q9H251 3354 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 SCAMP3O14828 347 aaKnown RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 ALOX15BO15296 676 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 SMNDC1O75940 238 aaKnown RBP eCLIP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 THPOP40225 353 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 MGAT5Q09328 741 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 AZIN2Q96A70 460 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 ULBP1Q9BZM6 244 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 SMYD2Q9NRG4 433 aa16.11■□□□□ 0.17
SCARF1-203ENST00000434376 ABT1Q9ULW3 272 aaKnown RBP16.11■□□□□ 0.17
SCARF1-203ENST00000434376 GNAT1P11488 350 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 IL4RP24394 825 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 TAF6P49848 677 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 SPRYD7Q5W111 196 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 TMEM154Q6P9G4 183 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 CDHR3Q6ZTQ4 885 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 CROCCP2Q86T23 111 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 MTDHQ86UE4 582 aaKnown RBP16.1■□□□□ 0.17
SCARF1-203ENST00000434376 NAT8LQ8N9F0 302 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 CMASQ8NFW8 434 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-203ENST00000434376 CXorf38Q8TB03 319 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 WNT8BQ93098 351 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 PRR11Q96HE9 360 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-203ENST00000434376 KCTD15Q96SI1 283 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-203ENST00000434376 NRDE2Q9H7Z3 1164 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 DDIT4Q9NX09 232 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 PRG3Q9Y2Y8 225 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-203ENST00000434376 NRP1O14786 923 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 ELNP15502 786 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 GRM5P41594 1212 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 CACNA2D1P54289 1103 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 LILRA4P59901 499 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 MFSD5Q6N075 450 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 CGB2Q6NT52 195 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 VPS52Q8N1B4 723 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 RFWD2Q8NHY2 731 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 SLCO2A1Q92959 643 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 SNX27Q96L92 541 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 KLC2Q9H0B6 622 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 KLHL8Q9P2G9 620 aaPredicted RBP16.1■□□□□ 0.17
SCARF1-203ENST00000434376 SHOC2Q9UQ13 582 aa16.1■□□□□ 0.17
SCARF1-203ENST00000434376 FAM72CH0Y354 149 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 STRNO43815 780 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 FAM72AQ5TYM5 149 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 LRRC38Q5VT99 294 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 FAM72DQ6L9T8 149 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 FAM72BQ86X60 149 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 AGGF1Q8N302 714 aaeCLIP16.09■□□□□ 0.17
SCARF1-203ENST00000434376 RNF217Q8TC41 542 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 CYP3A43Q9HB55 503 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 TXLNGQ9NUQ3 528 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 MIOSQ9NXC5 875 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 MFSD11O43934 449 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 LUC7L3O95232 432 aaKnown RBP16.09■□□□□ 0.17
SCARF1-203ENST00000434376 BDNFP23560 247 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 DEUP1Q05D60 604 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 FSCN1Q16658 493 aaKnown RBP16.09■□□□□ 0.17
SCARF1-203ENST00000434376 GPRIN1Q7Z2K8 1008 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 B3GALNT2Q8NCR0 500 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 UBQLN1Q9UMX0 589 aaKnown RBP16.09■□□□□ 0.17
SCARF1-203ENST00000434376 C2CD2Q9Y426 696 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 YJEFN3A6XGL0 299 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 E7ENQ6 273 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 COPEO14579 308 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 GPR32O75388 356 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 AMHP03971 560 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 TTC7BQ86TV6 843 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 CYTH2Q99418 400 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 ADAMTS10Q9H324 1103 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 PIDD1Q9HB75 910 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 ARHGEF3Q9NR81 526 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 ST3GAL5Q9UNP4 418 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 CDY2AQ9Y6F7 541 aa16.09■□□□□ 0.17
SCARF1-203ENST00000434376 C17orf102A2RUQ5 167 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 M0QZ92 97 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 MGAT1P26572 445 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 PSMB4P28070 264 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 ALDH3A1P30838 453 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 CD52P31358 61 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 ATICP31939 592 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 TUBP50607 506 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 TMPRSS15P98073 1019 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 NDUFAF2Q8N183 169 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 SLC35F5Q8WV83 523 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 KBTBD7Q8WVZ9 684 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 ZNF75CPQ92670 426 aaPredicted RBP16.08■□□□□ 0.17
SCARF1-203ENST00000434376 SENP8Q96LD8 212 aa16.08■□□□□ 0.17
SCARF1-203ENST00000434376 RILPQ96NA2 401 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms