RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 TRIP4Q15650 581 aaPredicted RBP27.5■■□□□ 1.99
TMEM248-205ENST00000433271 ARL13BQ3SXY8 428 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 TMC5Q6UXY8 1006 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 RCOR2Q8IZ40 523 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 HSPH1Q92598 858 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 SLC39A13Q96H72 371 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 LRCH3Q96II8 777 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 SNRNP25Q9BV90 132 aaKnown RBP27.5■■□□□ 1.99
TMEM248-205ENST00000433271 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.5■■□□□ 1.99
TMEM248-205ENST00000433271 FZD10Q9ULW2 581 aa27.5■■□□□ 1.99
TMEM248-205ENST00000433271 HBS1LQ9Y450 684 aaKnown RBP27.5■■□□□ 1.99
TMEM248-205ENST00000433271 PYGMP11217 842 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 PFKLP17858 780 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 SCAPQ12770 1279 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ODF2Q5BJF6 829 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ZC3H12AQ5D1E8 599 aaKnown RBP27.49■■□□□ 1.99
TMEM248-205ENST00000433271 TXNDC8Q6A555 127 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 SHKBP1Q8TBC3 707 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ACSF2Q96CM8 615 aaPredicted RBP27.49■■□□□ 1.99
TMEM248-205ENST00000433271 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ARHGEF38Q9NXL2 777 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 CDC23Q9UJX2 597 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 SLC12A8A0AV02 714 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ZNF197O14709 1029 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ZNF185O15231 689 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 OLFM2O95897 454 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 KRT1P04264 644 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 CYP4F8P98187 520 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 RING1Q06587 406 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 ANKRD54Q6NXT1 300 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 KCTD6Q8NC69 237 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 RAPGEF5Q92565 580 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 RBM41Q96IZ5 413 aaKnown RBP27.49■■□□□ 1.99
TMEM248-205ENST00000433271 TRPC7Q9HCX4 862 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 AP4E1Q9UPM8 1137 aa27.49■■□□□ 1.99
TMEM248-205ENST00000433271 KCNU1A8MYU2 1149 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 OBSL1O75147 1896 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 IGLV3-27P01718 113 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 HOXB8P17481 243 aaPredicted RBP27.48■■□□□ 1.99
TMEM248-205ENST00000433271 HDCP19113 662 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 ZNF211Q13398 564 aaPredicted RBP27.48■■□□□ 1.99
TMEM248-205ENST00000433271 PRSS36Q5K4E3 855 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 TCEAL4Q96EI5 215 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 DOCK6Q96HP0 2047 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 FCRL2Q96LA5 508 aaPredicted RBP27.48■■□□□ 1.99
TMEM248-205ENST00000433271 TKTL2Q9H0I9 626 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 KLHL11Q9NVR0 708 aa27.48■■□□□ 1.99
TMEM248-205ENST00000433271 LRRD1A4D1F6 860 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 SOBPA7XYQ1 873 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 NRG2O14511 850 aaPredicted RBP27.47■■□□□ 1.99
TMEM248-205ENST00000433271 CEP104O60308 925 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 MOSPD3O75425 235 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 GJA1P17302 382 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 DDX6P26196 483 aaKnown RBP eCLIP27.47■■□□□ 1.99
TMEM248-205ENST00000433271 ARSEP51690 589 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 NTHL1P78549 312 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 COG7P83436 770 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 SLC5A9Q2M3M2 681 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 EFHC2Q5JST6 749 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 RARS2Q5T160 578 aaKnown RBP27.47■■□□□ 1.99
TMEM248-205ENST00000433271 CREG2Q8IUH2 290 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 CYP2S1Q96SQ9 504 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 ANLNQ9NQW6 1124 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 MRFAP1Q9Y605 127 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 DENND4CQ5VZ89 1909 aa27.47■■□□□ 1.99
TMEM248-205ENST00000433271 PI4K2BG5E9Z4 385 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 IGFBP4P22692 258 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 KDELR1P24390 212 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 COPS2P61201 443 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 PDK2Q15119 407 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 DPYSL2Q16555 572 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 CA9Q16790 459 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 ARHGAP15Q53QZ3 475 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 GPR149Q86SP6 731 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 MAP7D3Q8IWC1 876 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 ARL14EPQ8N8R7 260 aaPredicted RBP27.46■■□□□ 1.99
TMEM248-205ENST00000433271 MAB21L3Q8N8X9 362 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 RNF25Q96BH1 459 aaPredicted RBP27.46■■□□□ 1.99
TMEM248-205ENST00000433271 SLC22A12Q96S37 553 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 DHX35Q9H5Z1 703 aaKnown RBP27.46■■□□□ 1.99
TMEM248-205ENST00000433271 TMPRSS4Q9NRS4 437 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 GPATCH2LQ9NWQ4 482 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 RNF14Q9UBS8 474 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 NOTCH4Q99466 2003 aa27.46■■□□□ 1.99
TMEM248-205ENST00000433271 TRAV19A0A0A6YYK7 116 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 C3orf70A6NLC5 250 aaPredicted RBP27.45■■□□□ 1.99
TMEM248-205ENST00000433271 I6L893 689 aaPredicted RBP27.45■■□□□ 1.99
TMEM248-205ENST00000433271 APOEP02649 317 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 CETN2P41208 172 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 CDH6P55285 790 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 CTC1Q2NKJ3 1217 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 SEL1L2Q5TEA6 688 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 SYCE2Q6PIF2 218 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 CCDC50Q8IVM0 306 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 RASGEF1CQ8N431 466 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 FAM71BQ8TC56 605 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 FAM161BQ96MY7 647 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 HAPLN3Q96S86 360 aa27.45■■□□□ 1.99
TMEM248-205ENST00000433271 GAS2L1Q99501 681 aaPredicted RBP27.45■■□□□ 1.99
TMEM248-205ENST00000433271 KLF16Q9BXK1 252 aaPredicted RBP27.45■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms