RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 KLHDC10Q6PID8 442 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 SLC23A3Q6PIS1 610 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 FMNL3Q8IVF7 1028 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 FMR1NBQ8N0W7 255 aaPredicted RBP14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 MINDY1Q8N5J2 469 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 KCNV2Q8TDN2 545 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 CYB5D2Q8WUJ1 264 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 KAT5Q92993 513 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 DUSP9Q99956 384 aaKnown RBP14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 MIR1-1HGQ9H1L0 117 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 CLIC5Q9NZA1 410 aa14.93□□□□□ -0.02
SMARCE1-205ENST00000431889 YJEFN3A6XGL0 299 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 E7ENQ6 273 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 ZBED1O96006 694 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 PENKP01210 267 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 CEACAM1P13688 526 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 GTF2H1P32780 548 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 SIM1P81133 766 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 COG7P83436 770 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 GFPT1Q06210 699 aaPredicted RBP14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 CUL2Q13617 745 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 DUOXA1Q1HG43 343 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 PLEKHG6Q3KR16 790 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 RAB41Q5JT25 222 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 SLC36A4Q6YBV0 504 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 TADA2BQ86TJ2 420 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 ANKRD52Q8NB46 1076 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 CLEC4CQ8WTT0 213 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 TOE1Q96GM8 510 aaKnown RBP14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 GPR174Q9BXC1 333 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 PRDM16Q9HAZ2 1276 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 FBXO10Q9UK96 956 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 SLC6A14Q9UN76 642 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 WASF3Q9UPY6 502 aa14.92□□□□□ -0.02
SMARCE1-205ENST00000431889 CEP295Q9C0D2 2601 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 GOLGA6L7A0A1B0GV03 622 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 GABBR2O75899 941 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 PSEN1P49768 467 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 ZNF234Q14588 700 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 ZNF658Q5TYW1 1059 aaPredicted RBP14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 ARHGAP17Q68EM7 881 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 UNQ6494/PRO21346Q6UXR6 183 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 HDDC3Q8N4P3 179 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 TFAP2BQ92481 460 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 PIWIL1Q96J94 861 aaKnown RBP14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 LRRC4Q9HBW1 653 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 CAPN10Q9HC96 672 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 KLK13Q9UKR3 277 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 ZMIZ1Q9ULJ6 1067 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 STRIP2Q9ULQ0 834 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 CACNA1EQ15878 2313 aa14.91□□□□□ -0.02
SMARCE1-205ENST00000431889 RNF225M0QZC1 329 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ZNF217O75362 1048 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 SERPINF2P08697 491 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 CSRP1P21291 193 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 SGO2Q562F6 1265 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 BSPRYQ5W0U4 402 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 KLHL10Q6JEL2 608 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 RFWD3Q6PCD5 774 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 IPO9Q96P70 1041 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 TSG101Q99816 390 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ADAM33Q9BZ11 813 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 THAP10Q9P2Z0 257 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 GTF3C3Q9Y5Q9 886 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 SLCO1B1Q9Y6L6 691 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 FREM2Q5SZK8 3169 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 NUMA1Q14980 2115 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 MEI4A8MW99 385 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ARHGAP33O14559 1287 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 XPO1O14980 1071 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 CYBBP04839 570 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 EPHX1P07099 455 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 BRD2P25440 801 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 CD6P30203 668 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 CHKAP35790 457 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 SEMA3BQ13214 749 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 STARD3Q14849 445 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 PEAR1Q5VY43 1037 aaPredicted RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 TMEM270Q6UE05 265 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ANKS1BQ7Z6G8 1248 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 TMPRSS6Q8IU80 811 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ZCCHC9Q8N567 271 aaKnown RBP14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 PNPLA1Q8N8W4 532 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 WFDC5Q8TCV5 224 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ZSWIM1Q9BR11 485 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 MTG2Q9H4K7 406 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 IL21RQ9HBE5 538 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ELOVL2Q9NXB9 296 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 ATP6V1DQ9Y5K8 247 aa14.9□□□□□ -0.02
SMARCE1-205ENST00000431889 GOLGA6L4A6NEF3 574 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 PCNX2A6NKB5 2137 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 SH3BP5O60239 455 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 STX10O60499 249 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 SYNCRIPO60506 623 aaKnown RBP14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 OPHN1O60890 802 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 PROS1P07225 676 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 NCAM1P13591 858 aa14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 HOXD9P28356 352 aaPredicted RBP14.89□□□□□ -0.03
SMARCE1-205ENST00000431889 TPMTP51580 245 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms