RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 SLC6A17Q9H1V8 727 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 ABCC13Q9NSE7 274 aa13.08□□□□□ -0.32
SMPD4-204ENST00000430682 SAMSN1Q9NSI8 373 aaKnown RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
SMPD4-204ENST00000430682 GOLGA6L7A0A1B0GV03 622 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 PAPSS1O43252 624 aaPredicted RBP13.07□□□□□ -0.32
SMPD4-204ENST00000430682 FGFR1OPO95684 399 aaKnown RBP13.07□□□□□ -0.32
SMPD4-204ENST00000430682 IGLV3-27P01718 113 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 LTFP02788 710 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 MTIF2P46199 727 aaKnown RBP13.07□□□□□ -0.32
SMPD4-204ENST00000430682 ATXN1P54253 815 aaKnown RBP13.07□□□□□ -0.32
SMPD4-204ENST00000430682 MFAP3P55082 362 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 KCNMA1Q12791 1236 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 CSRP2Q16527 193 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 PLA2G2CQ5R387 149 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 TCEAL6Q6IPX3 200 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 GBP6Q6ZN66 633 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 PRR23CQ6ZRP0 262 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 CPXM2Q8N436 756 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 CCDC26Q8TAB7 109 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 IRGQQ8WZA9 623 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 SHC3Q92529 594 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 TCEAL3Q969E4 200 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 PLD4Q96BZ4 506 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 HSFY1Q96LI6 401 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 XPO6Q96QU8 1125 aaKnown RBP13.07□□□□□ -0.32
SMPD4-204ENST00000430682 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 DCLK3Q9C098 648 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 THAP9Q9H5L6 903 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 CD93Q9NPY3 652 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 CACNA2D2Q9NY47 1150 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 APEX2Q9UBZ4 518 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 HBS1LQ9Y450 684 aaKnown RBP13.07□□□□□ -0.32
SMPD4-204ENST00000430682 RAD54BQ9Y620 910 aa13.07□□□□□ -0.32
SMPD4-204ENST00000430682 NYNRINQ9P2P1 1898 aaKnown RBP13.06□□□□□ -0.32
SMPD4-204ENST00000430682 KNL1Q8NG31 2342 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 TCRBV21S2A2A0A5A6 115 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 THAP12O43422 761 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 LRP3O75074 770 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 HOXB2P14652 356 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 GABRG2P18507 467 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 HOXD9P28356 352 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-204ENST00000430682 GNA15P30679 374 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 NTSR1P30989 418 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 SLC6A4P31645 630 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 CLCN1P35523 988 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 P2RY2P41231 377 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 PITX1P78337 314 aaPredicted RBP13.06□□□□□ -0.32
SMPD4-204ENST00000430682 STILQ15468 1287 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 TAF5Q15542 800 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 EXOC3L4Q17RC7 722 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 MAP7D1Q3KQU3 841 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 EOGTQ5NDL2 527 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 SYPL2Q5VXT5 272 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 PMS2CLQ68D20 193 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 NADSYN1Q6IA69 706 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 GPR161Q8N6U8 529 aaKnown RBP13.06□□□□□ -0.32
SMPD4-204ENST00000430682 WFDC5Q8TCV5 224 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 DQX1Q8TE96 717 aaKnown RBP13.06□□□□□ -0.32
SMPD4-204ENST00000430682 RNF139Q8WU17 664 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 HMGB4Q8WW32 186 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 SORCS1Q8WY21 1168 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 OLA1Q9NTK5 396 aaKnown RBP13.06□□□□□ -0.32
SMPD4-204ENST00000430682 STOML2Q9UJZ1 356 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 STRIP2Q9ULQ0 834 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 NAALADL1Q9UQQ1 740 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 ZNF510Q9Y2H8 683 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 SLC27A6Q9Y2P4 619 aa13.06□□□□□ -0.32
SMPD4-204ENST00000430682 CACNA1EQ15878 2313 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 MED19A0JLT2 244 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 GTPBP10A4D1E9 387 aaKnown RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 E5RJQ4 531 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 FOXN3O00409 490 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 ZNF806P0C7X5 589 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 ERCC5P28715 1186 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 CHKAP35790 457 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 USP8P40818 1118 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 LMNB2Q03252 620 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 PUM1Q14671 1186 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 HSF5Q4G112 596 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 VWA3BQ502W6 1294 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 FAM133BQ5BKY9 247 aaKnown RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 RFWD3Q6PCD5 774 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 RBM43Q6ZSC3 357 aaKnown RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 ADAM32Q8TC27 787 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 KCNV2Q8TDN2 545 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 LOXL4Q96JB6 756 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 FCRL2Q96LA5 508 aaPredicted RBP13.05□□□□□ -0.32
SMPD4-204ENST00000430682 GABRG3Q99928 467 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 TUBGCP2Q9BSJ2 902 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 ST7Q9NRC1 585 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 DNAJC12Q9UKB3 198 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 FRYQ5TBA9 3013 aa13.05□□□□□ -0.32
SMPD4-204ENST00000430682 FAM170AA1A519 330 aa13.04□□□□□ -0.32
SMPD4-204ENST00000430682 BCLAF3A2AJT9 711 aaKnown RBP13.04□□□□□ -0.32
SMPD4-204ENST00000430682 DCDC2BA2VCK2 349 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms