RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CLIC5Q9NZA1 410 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 NUMA1Q14980 2115 aa17.74■□□□□ 0.43
UBE3D-204ENST00000430071 ASCC3Q8N3C0 2202 aaKnown RBP17.73■□□□□ 0.43
UBE3D-204ENST00000430071 CKAP5Q14008 2032 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 CCDC163A0A0D9SF12 145 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 PRRT4C9JH25 899 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 F8VZ95 297 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 GDF9O60383 454 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 ZBED1O96006 694 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 TYRP14679 529 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 USP8P40818 1118 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 GRIA2P42262 883 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 WASP42768 502 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 RGS7P49802 495 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 BCAT1P54687 386 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 JAM2P57087 298 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 ADIGQ0VDE8 80 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 BST2Q10589 180 aaKnown RBP17.73■□□□□ 0.43
UBE3D-204ENST00000430071 CRY1Q16526 586 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 ANO7Q6IWH7 933 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 SARM1Q6SZW1 724 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 FAM71AQ8IYT1 594 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 MDGA1Q8NFP4 955 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 TSTD1Q8NFU3 115 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 SECISBP2LQ93073 1101 aaKnown RBP17.73■□□□□ 0.43
UBE3D-204ENST00000430071 ACOX2Q99424 681 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 BBS2Q9BXC9 721 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 DNAI2Q9GZS0 605 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 DUSP15Q9H1R2 295 aaPredicted RBP17.73■□□□□ 0.43
UBE3D-204ENST00000430071 ARRDC1-AS1Q9H2J1 176 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 SEMA4GQ9NTN9 838 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 DLL3Q9NYJ7 618 aa17.73■□□□□ 0.43
UBE3D-204ENST00000430071 TBC1D3BA6NDS4 549 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 YJEFN3A6XGL0 299 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 E7ENQ6 273 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 CISD3P0C7P0 127 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 RALAP11233 206 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 BCKDHBP21953 392 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 CLCN1P35523 988 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 PSEN1P49768 467 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 MRPS21P82921 87 aaKnown RBP17.72■□□□□ 0.43
UBE3D-204ENST00000430071 SF3A2Q15428 464 aaKnown RBP17.72■□□□□ 0.43
UBE3D-204ENST00000430071 PLK5Q496M5 336 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 PMF1Q6P1K2 205 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 LCLAT1Q6UWP7 414 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 TERB1Q8NA31 727 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 CLEC4CQ8WTT0 213 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 RLN3Q8WXF3 142 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 EDEM1Q92611 657 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 TTYH3Q9C0H2 523 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 RXFP3Q9NSD7 469 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 DNAJC17Q9NVM6 304 aaKnown RBP17.72■□□□□ 0.43
UBE3D-204ENST00000430071 DEC1Q9P2X7 70 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 EBF1Q9UH73 591 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 LSM7Q9UK45 103 aaKnown RBP17.72■□□□□ 0.43
UBE3D-204ENST00000430071 KIAA1257Q9ULG3 409 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 DAAM1Q9Y4D1 1078 aa17.72■□□□□ 0.43
UBE3D-204ENST00000430071 SLC12A8A0AV02 714 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 CBFA2T2O43439 604 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 CACNG3O60359 315 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 LCP1P13796 627 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 CORO1AP31146 461 aaKnown RBP17.71■□□□□ 0.43
UBE3D-204ENST00000430071 TNFRSF4P43489 277 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 BTBD8Q5XKL5 378 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 EGFLAMQ63HQ2 1017 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 SMYD5Q6GMV2 418 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 CACNA2D4Q7Z3S7 1137 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 RASSF3Q86WH2 238 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 SLC35F5Q8WV83 523 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 BAP1Q92560 729 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 LRRC4Q9HBW1 653 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 MARK1Q9P0L2 795 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 MARCH2Q9P0N8 246 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 HESX1Q9UBX0 185 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 SFMBT1Q9UHJ3 866 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 AGO1Q9UL18 857 aaKnown RBP17.71■□□□□ 0.43
UBE3D-204ENST00000430071 CLEC4EQ9ULY5 219 aa17.71■□□□□ 0.43
UBE3D-204ENST00000430071 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.71■□□□□ 0.43
UBE3D-204ENST00000430071 MED19A0JLT2 244 aaPredicted RBP17.7■□□□□ 0.42
UBE3D-204ENST00000430071 GNA15P30679 374 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 ATXN1P54253 815 aaKnown RBP17.7■□□□□ 0.42
UBE3D-204ENST00000430071 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 GRAMD4Q6IC98 578 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 PRR23CQ6ZRP0 262 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 SLC47A2Q86VL8 602 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 DENND1CQ8IV53 801 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 ZC3H10Q96K80 434 aaKnown RBP17.7■□□□□ 0.42
UBE3D-204ENST00000430071 KNL1Q8NG31 2342 aa17.7■□□□□ 0.42
UBE3D-204ENST00000430071 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.69■□□□□ 0.42
UBE3D-204ENST00000430071 M0QYV0 167 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 GFPT2O94808 682 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 EPN2O95208 641 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 TPM3P06753 285 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 SOX5P35711 763 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 DAOAP59103 153 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 GOLGA8FQ08AF8 430 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 GOLGA8DPQ0D2H9 430 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 CNGA2Q16280 664 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 BSPRYQ5W0U4 402 aa17.69■□□□□ 0.42
UBE3D-204ENST00000430071 RSRC2Q7L4I2 434 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms