RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ERBB2P04626 1255 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 HNRNPCP07910 306 aaKnown RBP eCLIP13□□□□□ -0.33
CPNE4-201ENST00000429747 CYLC2Q14093 348 aaPredicted RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 ABHD15Q6UXT9 468 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 FAM228AQ86W67 206 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 L3MBTL3Q96JM7 780 aaPredicted RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 SERAC1Q96JX3 654 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 CATSPER2Q96P56 530 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 ACO2Q99798 780 aaKnown RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 HERPUD2Q9BSE4 406 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 SUN2Q9UH99 717 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 RUVBL2Q9Y230 463 aaKnown RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 WASF2Q9Y6W5 498 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 MYO5AQ9Y4I1 1855 aaKnown RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 JCHAINP01591 159 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 INSRRP14616 1297 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 LAMB3Q13751 1172 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 C1orf220Q5T0J3 134 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 SLC39A4Q6P5W5 647 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 KYAT3Q6YP21 454 aaKnown RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 SNX32Q86XE0 403 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 DDX1Q92499 740 aaKnown RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 APBB2Q92870 758 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 LRRC39Q96DD0 335 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 AP5M1Q9H0R1 490 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 MMADHCQ9H3L0 296 aaPredicted RBP13□□□□□ -0.33
CPNE4-201ENST00000429747 NRDE2Q9H7Z3 1164 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 EFCAB1Q9HAE3 211 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 ARHGEF38Q9NXL2 777 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 ZNF711Q9Y462 761 aa13□□□□□ -0.33
CPNE4-201ENST00000429747 CYP2C8P10632 490 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ATICP31939 592 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PKNOX1P55347 436 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ARPP19P56211 112 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 NSUN2Q08J23 767 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TMEM132BQ14DG7 1078 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ACSBG2Q5FVE4 666 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TEDDM1Q5T9Z0 273 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 NET1Q7Z628 596 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SETD3Q86TU7 594 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 DNERQ8NFT8 737 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 CDRT15Q96T59 188 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 NTPCRQ9BSD7 190 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TRIM15Q9C019 465 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ING2Q9H160 280 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 XPNPEP3Q9NQH7 507 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 CHST12Q9NRB3 414 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 WARS2Q9UGM6 360 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TCRBV7S3A2A0A539 114 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PMM2O15305 246 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SUPT3HO75486 399 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 KLRC2P26717 231 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 GSTT1P30711 240 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SLC6A3Q01959 620 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PDAP1Q13442 181 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PPHLN1Q8NEY8 458 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PBXIP1Q96AQ6 731 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 EBNA1BP2Q99848 306 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 CDT1Q9H211 546 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ZMYND8Q9ULU4 1186 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TJP1Q07157 1748 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TRIM13O60858 407 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ETS2P15036 469 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 KCNA2P16389 499 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 MRPS22P82650 360 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TNS4Q8IZW8 715 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 NUP93Q8N1F7 819 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 KYQ8NBH2 561 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SH3TC2Q8TF17 1288 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SLC10A4Q96EP9 437 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TJP2Q9UDY2 1190 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 VANGL2Q9ULK5 521 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PLLPQ9Y342 182 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SNX13Q9Y5W8 968 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 SPATA31C2B4DYI2 1134 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TIMM44O43615 452 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 LGR5O75473 907 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 PGM3O95394 542 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 CHEK2O96017 543 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 BCAT1P54687 386 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 BANPQ8N9N5 519 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ADAM32Q8TC27 787 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 DTNBP1Q96EV8 351 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 RHBDL2Q9NX52 303 aa12.99□□□□□ -0.33
CPNE4-201ENST00000429747 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 STX18Q9P2W9 335 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 TSR3Q9UJK0 312 aaKnown RBP12.99□□□□□ -0.33
CPNE4-201ENST00000429747 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 UBA6A0AVT1 1052 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 AHCYL1O43865 530 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 TBC1D12O60347 775 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 MYL3P08590 195 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 CCNB1P14635 433 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 TSHRP16473 764 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 NOMO1Q15155 1222 aa12.98□□□□□ -0.33
CPNE4-201ENST00000429747 SIX1Q15475 284 aaPredicted RBP12.98□□□□□ -0.33
CPNE4-201ENST00000429747 SPDYAQ5MJ70 313 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms