RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	BIN1	O00499	593 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	CISD3	P0C7P0	127 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	HOXB3	P14651	431 aa	Predicted RBP	18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	CD19	P15391	556 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	DPP6	P42658	865 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	PTGER3	P43115	390 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	EFEMP1	Q12805	493 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	C10orf76	Q5T2E6	689 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	GRAMD4	Q6IC98	578 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	SLC23A3	Q6PIS1	610 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	TMEM270	Q6UE05	265 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	TRMT11	Q7Z4G4	463 aa	Known RBP	18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	TMEFF1	Q8IYR6	380 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	FRMD1	Q8N878	549 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	KCTD13	Q8WZ19	329 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	ULBP1	Q9BZM6	244 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	HESX1	Q9UBX0	185 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	MBD1	Q9UIS9	605 aa	Predicted RBP	18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	NEUROG3	Q9Y4Z2	214 aa		18.58	■□□□□ 0.56
MRPL28-203	ENST00000429738	UPK3BL1	B0FP48	263 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	PRRT4	C9JH25	899 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	UPK3BL2	E5RIL1	263 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	RNF225	M0QZC1	329 aa	Predicted RBP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	GNA14	O95837	355 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	PENK	P01210	267 aa	Predicted RBP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	SETSIP	P0DME0	302 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	ENG	P17813	658 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	MAPK8	P45983	427 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	PAK1	Q13153	545 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	MAP7D1	Q3KQU3	841 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	FYB2	Q5VWT5	728 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	LCLAT1	Q6UWP7	414 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	TOGARAM2	Q6ZUX3	1019 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	ARMCX6	Q7L4S7	300 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	SCML4	Q8N228	414 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	TRIML1	Q8N9V2	468 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	TFAP2B	Q92481	460 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	NDRG1	Q92597	394 aa	Known RBP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	KAT5	Q92993	513 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	ZSWIM1	Q9BR11	485 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	DCLK3	Q9C098	648 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	LRRC4	Q9HBW1	653 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	CD248	Q9HCU0	757 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	MARCH2	Q9P0N8	246 aa		18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	AGO1	Q9UL18	857 aa	Known RBP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	ANKRD11	Q6UB99	2663 aa	Predicted RBP	18.57	■□□□□ 0.56
MRPL28-203	ENST00000429738	DSP	P15924	2871 aa	Known RBP	18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	DMXL2	Q8TDJ6	3036 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	HYAL3	O43820	417 aa	Predicted RBP	18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	CORO1A	P31146	461 aa	Known RBP	18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	CHKA	P35790	457 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	STX17	P56962	302 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	GCNT1	Q02742	428 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	ADIG	Q0VDE8	80 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	CETN1	Q12798	172 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	KCNH2	Q12809	1159 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	SEMA3B	Q13214	749 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	EGFLAM	Q63HQ2	1017 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	KIAA1211L	Q6NV74	962 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	PIP4P1	Q86T03	277 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	FAM217A	Q8IXS0	508 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	PPM1K	Q8N3J5	372 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	UBA3	Q8TBC4	463 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	SLC35F5	Q8WV83	523 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	HMGB4	Q8WW32	186 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	ZCCHC14	Q8WYQ9	949 aa	Known RBP	18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	CNGB3	Q9NQW8	809 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	PILRB	Q9UKJ0	227 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738	MSRB2	Q9Y3D2	182 aa		18.56	■□□□□ 0.56
MRPL28-203	ENST00000429738		A0A1W2PQF6	199 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	TCRBV21S2A2	A0A5A6	115 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	SLC12A8	A0AV02	714 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	GABBR2	O75899	941 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	NTSR1	P30989	418 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	HOXD12	P35452	270 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	DGKG	P49619	791 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	ZNF132	P52740	706 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	UBE2H	P62256	183 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	TRIP4	Q15650	581 aa	Predicted RBP	18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	CNGA2	Q16280	664 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	LYSMD4	Q5XG99	296 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	LRSAM1	Q6UWE0	723 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	RSRC2	Q7L4I2	434 aa	Known RBP	18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	ARHGEF19	Q8IW93	802 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	PGBD3	Q8N328	593 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	CPXM2	Q8N436	756 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	EHBP1	Q8NDI1	1231 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	PLD4	Q96BZ4	506 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	GABRG3	Q99928	467 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	SRRT	Q9BXP5	876 aa	Known RBP	18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	OLA1	Q9NTK5	396 aa	Known RBP	18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	PLK2	Q9NYY3	685 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	KIAA1468	Q9P260	1216 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	STRIP2	Q9ULQ0	834 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	SLC6A14	Q9UN76	642 aa		18.55	■□□□□ 0.56
MRPL28-203	ENST00000429738	SLC27A6	Q9Y2P4	619 aa		18.55	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms