RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 NDE1Q9NXR1 346 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 WDR35Q9P2L0 1181 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 C19orf81C9J6K1 198 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 C2CD2LO14523 706 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PMM2O15305 246 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PRPF4O43172 522 aaKnown RBP eCLIP8.33□□□□□ -1.08
HPS4-205ENST00000429411 HSPA4LO95757 839 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 TRUB2O95900 331 aaKnown RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 OAS1P00973 400 aaKnown RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 TPBGLP0DKB5 382 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 INSRRP14616 1297 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 TCN1P20061 433 aaPredicted RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 CYP2F1P24903 491 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CCNHP51946 323 aaPredicted RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 CA9Q16790 459 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 METTL7BQ6UX53 244 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 ZPBP2Q6X784 338 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CATSPERGQ6ZRH7 1159 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 C15orf39Q6ZRI6 1047 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 CDHR3Q6ZTQ4 885 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 XYLT1Q86Y38 959 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 SPDYE1Q8NFV5 336 aaPredicted RBP8.33□□□□□ -1.08
HPS4-205ENST00000429411 SLC35B2Q8TB61 432 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 UCMAQ8WVF2 138 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PYDC1Q8WXC3 89 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PTPN18Q99952 460 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 ZNF518BQ9C0D4 1074 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 SNX25Q9H3E2 840 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 EBF2Q9HAK2 575 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 MAN1C1Q9NR34 630 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 DPP3Q9NY33 737 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 PRKAG3Q9UGI9 489 aa8.33□□□□□ -1.08
HPS4-205ENST00000429411 MYH9P35579 1960 aaKnown RBP8.32□□□□□ -1.08
HPS4-205ENST00000429411 TM9SF1O15321 606 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 MSCO60682 206 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 ELNP15502 786 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 AKAP5P24588 427 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 ATICP31939 592 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 SLC8A3P57103 927 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 PTP4A2Q12974 167 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 TCHHL1Q5QJ38 904 aaPredicted RBP8.32□□□□□ -1.08
HPS4-205ENST00000429411 KCNT2Q6UVM3 1135 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 GIPC2Q8TF65 315 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 WDR60Q8WVS4 1066 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 SNRNP25Q9BV90 132 aaKnown RBP8.32□□□□□ -1.08
HPS4-205ENST00000429411 SPATC1LQ9H0A9 340 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 NMRK1Q9NWW6 199 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 BTBD7Q9P203 1132 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 DPPA5A6NC42 116 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 MANSC4A6NHS7 340 aaPredicted RBP8.32□□□□□ -1.08
HPS4-205ENST00000429411 PRR5-ARHGAP8B1AHC4 643 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 E9PBE3 544 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 GSC2O15499 205 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 KLHL41O60662 606 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 ARIH2O95376 493 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 CCDC130P13994 396 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 GM2AP17900 193 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 MSX2P35548 267 aaPredicted RBP8.32□□□□□ -1.08
HPS4-205ENST00000429411 ASPAP45381 313 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 GLRBP48167 497 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 RABGGTBP53611 331 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 ARHGAP8P85298 464 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 TCEAL1Q15170 157 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 LRRC38Q5VT99 294 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 IZUMO2Q6UXV1 221 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 TRIM42Q8IWZ5 723 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 MPP5Q8N3R9 675 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 NAT8LQ8N9F0 302 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 CLEC4CQ8WTT0 213 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 TEKT4Q8WW24 435 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 LGMNQ99538 433 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 TRIM4Q9C037 500 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 SDCBP2Q9H190 292 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 LRRC4Q9HBW1 653 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 SLC5A4Q9NY91 659 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 TAS2R1Q9NYW7 299 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 MAFBQ9Y5Q3 323 aaPredicted RBP8.32□□□□□ -1.08
HPS4-205ENST00000429411 HTTP42858 3142 aa8.32□□□□□ -1.08
HPS4-205ENST00000429411 RBM47A0AV96 593 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 ACKR2O00590 384 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 AIM2O14862 343 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 MAFO75444 373 aaPredicted RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 SLC10A3P09131 477 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ACAT1P24752 427 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 TBX4P57082 545 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RTP1P59025 263 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RBP5P82980 135 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 HIC1Q14526 733 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 FASTKD1Q53R41 847 aaKnown RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 ACSBG2Q5FVE4 666 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 PPP1R26Q5T8A7 1209 aaPredicted RBP8.31□□□□□ -1.08
HPS4-205ENST00000429411 VWA5B1Q5TIE3 1220 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RNF220Q5VTB9 566 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 ADGRD1Q6QNK2 874 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 LRRC74BQ6ZQY2 392 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 C4orf50Q6ZRC1 276 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 RASSF3Q86WH2 238 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SCUBE1Q8IWY4 988 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 CCNYL1Q8N7R7 359 aa8.31□□□□□ -1.08
HPS4-205ENST00000429411 SLC4A11Q8NBS3 891 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms