RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 USP17L11C9JVI0 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L18D6R9N7 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L22D6RA61 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L17D6RBQ6 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L19D6RCP7 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L20D6RJB6 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SUPT3HO75486 399 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ATP6V1B1P15313 513 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 RARRES1P49788 294 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L24Q0WX57 530 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PDK1Q15118 436 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ARL13BQ3SXY8 428 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GTF2IRD2BQ6EKJ0 949 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP17L6PQ6QN14 398 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ATG14Q6ZNE5 492 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GTF2IRD2Q86UP8 949 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SLC26A7Q8TE54 656 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 USP33Q8TEY7 942 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CELF1Q92879 486 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 SLITRK1Q96PX8 696 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 EBF4Q9BQW3 602 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 GNPTGQ9UJJ9 305 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 A0A087WXM4 84 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CIB2O75838 187 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 BAG2O95816 211 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 MT-ND3P03897 115 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ENO1P06733 434 aaKnown RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 BMP3P12645 472 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ALDH1A3P47895 512 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 AQP5P55064 265 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 NOMO3P69849 1222 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 ZNF252P-AS1Q0IIN9 211 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 MOGQ16653 247 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 CCDC92Q53HC0 331 aaPredicted RBP5.31□□□□□ -1.56
RIF1-203ENST00000428287 ODR4Q5SWX8 454 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 OLFML2BQ68BL8 750 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 TPTE2Q6XPS3 522 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 SHKBP1Q8TBC3 707 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PRDM16Q9HAZ2 1276 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 MTMR10Q9NXD2 777 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 BCAP29Q9UHQ4 241 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 PCDHAC2Q9Y5I4 1007 aa5.31□□□□□ -1.56
RIF1-203ENST00000428287 IQCA1LA6NCM1 817 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 MSH4O15457 936 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CLASP2O75122 1294 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 CNTFP26441 200 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 RPS3AP61247 264 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 THOC7Q6I9Y2 204 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 MAVSQ7Z434 540 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TUBA1CQ9BQE3 449 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 MOCS1Q9NZB8 636 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TCAF1Q9Y4C2 921 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 RGSL1A5PLK6 1076 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TBCAO75347 108 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 ZSCAN5DPP0CG00 497 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CPA2P48052 419 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 GHRHRQ02643 423 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PIGHQ14442 188 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 VPS72Q15906 364 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SEPT7Q16181 437 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 FGD3Q5JSP0 725 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SETD3Q86TU7 594 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 POU5F2Q8N7G0 328 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PDCD6IPQ8WUM4 868 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 RTKNQ9BST9 563 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ZHX3Q9H4I2 956 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 POPDC2Q9HBU9 364 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CFAP54Q96N23 3096 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 LDHBP07195 334 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 ATF7P17544 494 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 PSMC3P17980 439 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 DLG4P78352 724 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PPIL2Q13356 520 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 LRRC36Q1X8D7 754 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CYP2W1Q8TAV3 490 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 SNRNP27Q8WVK2 155 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 USP6NLQ92738 828 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ISL2Q96A47 359 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ISOC1Q96CN7 298 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PARVAQ9NVD7 372 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 COQ6Q9Y2Z9 468 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 C2orf71A6NGG8 1288 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CYB561D2O14569 222 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PLIN3O60664 434 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 KRT38O76015 456 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 KRT18P05783 430 aaKnown RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 RXRGP48443 463 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 GCLMP48507 274 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ACAP1Q15027 740 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ANKDD1AQ495B1 522 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 LPCAT2Q7L5N7 544 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 DEFB107AQ8IZN7 70 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 FEZF2Q8TBJ5 459 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CABLES1Q8TDN4 633 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 CHORDC1Q9UHD1 332 aaPredicted RBP5.3□□□□□ -1.56
RIF1-203ENST00000428287 SLC15A5A6NIM6 579 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 ERBB2P04626 1255 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 PRKCGP05129 697 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 BMP2P12643 396 aa5.3□□□□□ -1.56
RIF1-203ENST00000428287 TCF7P36402 384 aaPredicted RBP5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms