RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 UCMAQ8WVF2 138 aa21.55■■□□□ 1.04
HSPG2-205ENST00000427897 SHC3Q92529 594 aa21.55■■□□□ 1.04
HSPG2-205ENST00000427897 ACP6Q9NPH0 428 aa21.55■■□□□ 1.04
HSPG2-205ENST00000427897 TCRBV21S2A2A0A5A6 115 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 BECN2A8MW95 431 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 MAP3K13O43283 966 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 GABBR2O75899 941 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 HOXB2P14652 356 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 ZNF445P59923 1031 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 NUGGCQ68CJ6 796 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 MSANTD2Q6P1R3 559 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 C11orf74Q86VG3 221 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 HMGB4Q8WW32 186 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 TMA16Q96EY4 203 aaKnown RBP21.54■■□□□ 1.04
HSPG2-205ENST00000427897 VPS16Q9H269 839 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 SYNCQ9H7C4 482 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 TAB2Q9NYJ8 693 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 STARD13Q9Y3M8 1113 aa21.54■■□□□ 1.04
HSPG2-205ENST00000427897 E5RJQ4 531 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 FOXN3O00409 490 aaPredicted RBP21.53■■□□□ 1.04
HSPG2-205ENST00000427897 SDHBP21912 280 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 LMNB2Q03252 620 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 BYSLQ13895 437 aaKnown RBP21.53■■□□□ 1.04
HSPG2-205ENST00000427897 MIIPQ5JXC2 388 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 FKBP15Q5T1M5 1219 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 ADGRF1Q5T601 910 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 FYB2Q5VWT5 728 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 EGFLAMQ63HQ2 1017 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 PASD1Q8IV76 773 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 LOXL4Q96JB6 756 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 SPACA7Q96KW9 195 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 SERPINB11Q96P15 392 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 DDX50Q9BQ39 737 aaKnown RBP21.53■■□□□ 1.04
HSPG2-205ENST00000427897 LSM14BQ9BX40 385 aaKnown RBP21.53■■□□□ 1.04
HSPG2-205ENST00000427897 SLC4A5Q9BY07 1137 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 SIX2Q9NPC8 291 aa21.53■■□□□ 1.04
HSPG2-205ENST00000427897 TYW5A2RUC4 315 aaKnown RBP21.52■■□□□ 1.04
HSPG2-205ENST00000427897 PRRT4C9JH25 899 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 DCLK1O15075 740 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 LRP3O75074 770 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 LATS1O95835 1130 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 PENKP01210 267 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-205ENST00000427897 CISD3P0C7P0 127 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 CDK11BP21127 795 aaKnown RBP21.52■■□□□ 1.04
HSPG2-205ENST00000427897 STX1AQ16623 288 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 CCDC183Q5T5S1 534 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 SMYD5Q6GMV2 418 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 MDGA1Q8NFP4 955 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 PPP1R13BQ96KQ4 1090 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 PCMTD1Q96MG8 357 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-205ENST00000427897 SLC2A11Q9BYW1 496 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 ARRDC1-AS1Q9H2J1 176 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 POPDC2Q9HBU9 364 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 NAALADL1Q9UQQ1 740 aa21.52■■□□□ 1.04
HSPG2-205ENST00000427897 PRR5-ARHGAP8B1AHC4 643 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 ADAM23O75077 832 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 RPL34P49207 117 aaKnown RBP21.51■■□□□ 1.03
HSPG2-205ENST00000427897 YWHAZP63104 245 aaKnown RBP21.51■■□□□ 1.03
HSPG2-205ENST00000427897 ARHGAP8P85298 464 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 RING1Q06587 406 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 PDCLQ13371 301 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 DRAP1Q14919 205 aaPredicted RBP21.51■■□□□ 1.03
HSPG2-205ENST00000427897 ANKS1BQ7Z6G8 1248 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 TMEM110Q86TL2 294 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 RASSF3Q86WH2 238 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 CCDC117Q8IWD4 279 aaPredicted RBP21.51■■□□□ 1.03
HSPG2-205ENST00000427897 C12orf50Q8NA57 414 aaPredicted RBP21.51■■□□□ 1.03
HSPG2-205ENST00000427897 CIPCQ9C0C6 399 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 SEMA4GQ9NTN9 838 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 FBXO10Q9UK96 956 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 PCDHGC3Q9UN70 934 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 SLC27A6Q9Y2P4 619 aa21.51■■□□□ 1.03
HSPG2-205ENST00000427897 ACSL4O60488 711 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 FOXD2O60548 495 aaPredicted RBP21.5■■□□□ 1.03
HSPG2-205ENST00000427897 KCNMA1Q12791 1236 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 PLK5Q496M5 336 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 EFHC1Q5JVL4 640 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 KLHDC7AQ5VTJ3 777 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 OR6B2Q6IFH4 312 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 RBM43Q6ZSC3 357 aaKnown RBP21.5■■□□□ 1.03
HSPG2-205ENST00000427897 SLC47A2Q86VL8 602 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 ADAM32Q8TC27 787 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 DQX1Q8TE96 717 aaKnown RBP21.5■■□□□ 1.03
HSPG2-205ENST00000427897 IPO4Q8TEX9 1081 aaKnown RBP21.5■■□□□ 1.03
HSPG2-205ENST00000427897 RNF34Q969K3 372 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 ZC3H10Q96K80 434 aaKnown RBP21.5■■□□□ 1.03
HSPG2-205ENST00000427897 LHX5Q9H2C1 402 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 FANCLQ9NW38 375 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 CACNA2D2Q9NY47 1150 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 SLC12A6Q9UHW9 1150 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 AJAP1Q9UKB5 411 aaPredicted RBP21.5■■□□□ 1.03
HSPG2-205ENST00000427897 TLR6Q9Y2C9 796 aa21.5■■□□□ 1.03
HSPG2-205ENST00000427897 DMDP11532 3685 aa21.49■■□□□ 1.03
HSPG2-205ENST00000427897 PAPSS1O43252 624 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-205ENST00000427897 MOCS2O96007 188 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-205ENST00000427897 APOEP02649 317 aa21.49■■□□□ 1.03
HSPG2-205ENST00000427897 PNMA6AP0CW24 399 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-205ENST00000427897 CLCN1P35523 988 aa21.49■■□□□ 1.03
HSPG2-205ENST00000427897 STARD3Q14849 445 aa21.49■■□□□ 1.03
HSPG2-205ENST00000427897 CSRP2Q16527 193 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms