RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 HMGB4Q8WW32 186 aa15.84■□□□□ 0.13
PHF1-204ENST00000427826 BHMTQ93088 406 aa15.84■□□□□ 0.13
PHF1-204ENST00000427826 TRIM62Q9BVG3 475 aa15.84■□□□□ 0.13
PHF1-204ENST00000427826 THAP9Q9H5L6 903 aa15.84■□□□□ 0.13
PHF1-204ENST00000427826 DNAH14Q0VDD8 3507 aa15.84■□□□□ 0.13
PHF1-204ENST00000427826 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.83■□□□□ 0.12
PHF1-204ENST00000427826 MAP3K13O43283 966 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 LTFP02788 710 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 ERCC5P28715 1186 aaPredicted RBP15.83■□□□□ 0.12
PHF1-204ENST00000427826 MPLP40238 635 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 CREB5Q02930 508 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 EXOC3L4Q17RC7 722 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 AASDHQ4L235 1098 aaPredicted RBP15.83■□□□□ 0.12
PHF1-204ENST00000427826 MPPE1Q53F39 396 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.12
PHF1-204ENST00000427826 SPDYCQ5MJ68 293 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 ADGRF1Q5T601 910 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 EGFLAMQ63HQ2 1017 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 PMS2CLQ68D20 193 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 MSANTD2Q6P1R3 559 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 TRIM65Q6PJ69 517 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 CLEC17AQ6ZS10 378 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 UNC45BQ8IWX7 931 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 UCMAQ8WVF2 138 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 MED15Q96RN5 788 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 GABRG3Q99928 467 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 CRACR2AQ9BSW2 395 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 IRX2Q9BZI1 471 aaPredicted RBP15.83■□□□□ 0.12
PHF1-204ENST00000427826 NUP62CLQ9H1M0 184 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 ZDHHC4Q9NPG8 344 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 APEX2Q9UBZ4 518 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 SFMBT1Q9UHJ3 866 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 STOML2Q9UJZ1 356 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 INVSQ9Y283 1065 aa15.83■□□□□ 0.12
PHF1-204ENST00000427826 KIAA1549LQ6ZVL6 1849 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 BCLAF3A2AJT9 711 aaKnown RBP15.82■□□□□ 0.12
PHF1-204ENST00000427826 PRRT4C9JH25 899 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 SLC30A4O14863 429 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 TIMM44O43615 452 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 LETM1O95202 739 aaPredicted RBP15.82■□□□□ 0.12
PHF1-204ENST00000427826 GNA15P30679 374 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 P2RY2P41231 377 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 GPD2P43304 727 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 RPL34P49207 117 aaKnown RBP15.82■□□□□ 0.12
PHF1-204ENST00000427826 EIF4HQ15056 248 aaKnown RBP15.82■□□□□ 0.12
PHF1-204ENST00000427826 NUGGCQ68CJ6 796 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 LPCAT2Q7L5N7 544 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 ANKS1BQ7Z6G8 1248 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 IRF2BP1Q8IU81 584 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 ZNF606Q8WXB4 792 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 ST7Q9NRC1 585 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 HCN2Q9UL51 889 aa15.82■□□□□ 0.12
PHF1-204ENST00000427826 A0A1W2PQF6 199 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 PIK3R2O00459 728 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 THAP12O43422 761 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 ZNF217O75362 1048 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 GABBR2O75899 941 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 CAVIN2O95810 425 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 CALCAP01258 141 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 SLC9A1P19634 815 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 USP8P40818 1118 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 WASP42768 502 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 SLC11A2P49281 568 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 LIMK1P53667 647 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 RING1Q06587 406 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 SF3A2Q15428 464 aaKnown RBP15.81■□□□□ 0.12
PHF1-204ENST00000427826 MAN2A1Q16706 1144 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 SLC36A4Q6YBV0 504 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 BEND5Q7L4P6 421 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 SCUBE3Q8IX30 993 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 IPO4Q8TEX9 1081 aaKnown RBP15.81■□□□□ 0.12
PHF1-204ENST00000427826 DDX1Q92499 740 aaKnown RBP15.81■□□□□ 0.12
PHF1-204ENST00000427826 AZIN2Q96A70 460 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 TMA16Q96EY4 203 aaKnown RBP15.81■□□□□ 0.12
PHF1-204ENST00000427826 PIWIL1Q96J94 861 aaKnown RBP15.81■□□□□ 0.12
PHF1-204ENST00000427826 MIS12Q9H081 205 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 CACNA1AO00555 2505 aa15.81■□□□□ 0.12
PHF1-204ENST00000427826 IRAK2O43187 625 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 MSI1O43347 362 aaKnown RBP15.8■□□□□ 0.12
PHF1-204ENST00000427826 GDF9O60383 454 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 NCAM1P13591 858 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 GABRG2P18507 467 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 PON1P27169 355 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 DPP6P42658 865 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 TBX4P57082 545 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 NNTQ13423 1086 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 STARD3Q14849 445 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 CCDC6Q16204 474 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 ARHGAP44Q17R89 818 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 MAP7D1Q3KQU3 841 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 DENND1BQ6P3S1 775 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 CYP2U1Q7Z449 544 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 TMEM110Q86TL2 294 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 ZNF557Q8N988 423 aaPredicted RBP15.8■□□□□ 0.12
PHF1-204ENST00000427826 CLEC4CQ8WTT0 213 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 RLN3Q8WXF3 142 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 P2RY11Q96G91 374 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 ACOX2Q99424 681 aa15.8■□□□□ 0.12
PHF1-204ENST00000427826 DDX50Q9BQ39 737 aaKnown RBP15.8■□□□□ 0.12
PHF1-204ENST00000427826 SLC4A5Q9BY07 1137 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms