RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 C1QTNF9BB2RNN3 333 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 XPO1O14980 1071 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 NPC1O15118 1278 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 PROS1P07225 676 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 C1QTNF9P0C862 333 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 FKBP3Q00688 224 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 GFPT1Q06210 699 aaPredicted RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 CUL2Q13617 745 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 TRIP4Q15650 581 aaPredicted RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 GOLGA7BQ2TAP0 167 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 DCAF17Q5H9S7 520 aaPredicted RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 ZNF658Q5TYW1 1059 aaPredicted RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 TMEM215Q68D42 235 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 KIAA1324Q6UXG2 1013 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 RSRC2Q7L4I2 434 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 RABEPKQ7Z6M1 372 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 METTL3Q86U44 580 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 ENGASEQ8NFI3 743 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 SLC35C1Q96A29 364 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 GSDMAQ96QA5 445 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 MKRN2Q9H000 416 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 RMND1Q9NWS8 449 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 USP36Q9P275 1121 aaKnown RBP13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 TSPAN16Q9UKR8 245 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 STRIP2Q9ULQ0 834 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 THADAQ6YHU6 1953 aa13.67□□□□□ -0.22
DEPDC7-203ENST00000427755 LAMA1P25391 3075 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 ARHGAP33O14559 1287 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 CD6P30203 668 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 ZNF132P52740 706 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 BCAT1P54687 386 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 SLC8A3P57103 927 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 PKDCCQ504Y2 493 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 TCERG1LQ5VWI1 586 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 UNQ6494/PRO21346Q6UXR6 183 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 ANKS1BQ7Z6G8 1248 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 OR2I1PQ8NGU4 316 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 ERCC4Q92889 916 aaPredicted RBP13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 PLD4Q96BZ4 506 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 CCDC34Q96HJ3 373 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 GTPBP2Q9BX10 602 aaKnown RBP13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 SLC32A1Q9H598 525 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 ELOVL2Q9NXB9 296 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 STOML2Q9UJZ1 356 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 NUP205Q92621 2012 aa13.66□□□□□ -0.22
DEPDC7-203ENST00000427755 TRIM49BA6NDI0 452 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 YJEFN3A6XGL0 299 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 KCNJ18B7U540 433 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 E7ENQ6 273 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 O00370 1275 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 GJB3O75712 270 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 GABBR2O75899 941 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 CYBBP04839 570 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 CD59P13987 128 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 PRKCHP24723 683 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 HOXD9P28356 352 aaPredicted RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 COPAP53621 1224 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 ATXN3P54252 364 aaPredicted RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 BST2Q10589 180 aaKnown RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 ZNF234Q14588 700 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 STARD3Q14849 445 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 EIF4HQ15056 248 aaKnown RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 SGO2Q562F6 1265 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 FMNL3Q8IVF7 1028 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 UBA3Q8TBC4 463 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 UCMAQ8WVF2 138 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 SORCS1Q8WY21 1168 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 KCTD13Q8WZ19 329 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 GATA6Q92908 595 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 FOXJ1Q92949 421 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 TOE1Q96GM8 510 aaKnown RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 TSG101Q99816 390 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 SCNM1Q9BWG6 230 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 SLC2A11Q9BYW1 496 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 ADAM33Q9BZ11 813 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 PRDM16Q9HAZ2 1276 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 LRRC4Q9HBW1 653 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 ITM2CQ9NQX7 267 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 OLA1Q9NTK5 396 aaKnown RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 DNAAF2Q9NVR5 837 aaKnown RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 WSB2Q9NYS7 404 aaPredicted RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 SFMBT1Q9UHJ3 866 aa13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 MYO18AQ92614 2054 aaKnown RBP13.65□□□□□ -0.22
DEPDC7-203ENST00000427755 TNRC6BQ9UPQ9 1833 aaKnown RBP13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 PLXND1Q9Y4D7 1925 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 GON4LQ3T8J9 2241 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 SPAARA0A1B0GVQ0 90 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 OPHN1O60890 802 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 NDUFS2O75306 463 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 IGLV3-19P01714 112 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 VDRP11473 427 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 NCAM1P13591 858 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 CD19P15391 556 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 MAOBP27338 520 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 FAM193AP78312 1265 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 LRRC63Q05C16 580 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 ADIGQ0VDE8 80 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 LRMPQ12912 555 aa13.64□□□□□ -0.23
DEPDC7-203ENST00000427755 BSPRYQ5W0U4 402 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms