RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 NCAM1P13591 858 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 PRKCIP41743 596 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 PITX1P78337 314 aaPredicted RBP16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 CLEC16AQ2KHT3 1053 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 ANO4Q32M45 955 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 LY6G5CQ5SRR4 150 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 MMS22LQ6ZRQ5 1243 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 XYLT1Q86Y38 959 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 RNF139Q8WU17 664 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 C18orf8Q96DM3 657 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 SYNCQ9H7C4 482 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 SPTLC3Q9NUV7 552 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 TAS2R14Q9NYV8 317 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 MARCH2Q9P0N8 246 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 STRIP2Q9ULQ0 834 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 R4GN57 208 aa16.37■□□□□ 0.21
CLK3P2-201ENST00000427566 SLC12A8A0AV02 714 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 STC2O76061 302 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 CCDC172P0C7W6 258 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 ADH5P11766 374 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 DRD1P21728 446 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 CCR3P51677 355 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 YWHAZP63104 245 aaKnown RBP16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 SLC6A3Q01959 620 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 KLHL30Q0D2K2 578 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 PTP4A2Q12974 167 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 CCINQ13939 588 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 GAS6Q14393 721 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 RHBDF2Q6PJF5 856 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 FMNL3Q8IVF7 1028 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 LRRC8AQ8IWT6 810 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 MAML2Q8IZL2 1156 aaPredicted RBP16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 NAT16Q8N8M0 369 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 ADAM32Q8TC27 787 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 IPO4Q8TEX9 1081 aaKnown RBP16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 OTUB2Q96DC9 234 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 C11orf70Q9BRQ4 267 aa16.36■□□□□ 0.21
CLK3P2-201ENST00000427566 TMCO5BA8MYB1 307 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 RNF40O75150 1001 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 KLKB1P03952 638 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 TNFAIP3P21580 790 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 MMP8P22894 467 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 CXCL12P48061 93 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SLC6A11P48066 632 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 ADKP55263 362 aaKnown RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SATB1Q01826 763 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 CENPCQ03188 943 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 GAD2Q05329 585 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 KDSRQ06136 332 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 PPP2R5DQ14738 602 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 TRIM72Q6ZMU5 477 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 TPGS1Q6ZTW0 290 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 HTR3DQ70Z44 454 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 TMC6Q7Z403 805 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SPEM1Q8N4L4 309 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 KIAA1958Q8N8K9 716 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 ZNF397Q8NF99 534 aaPredicted RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 GOLGA1Q92805 767 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 IER2Q9BTL4 223 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 POPDC2Q9HBU9 364 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 FBXO4Q9UKT5 387 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 GOLGA8SH3BPF8 625 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 DDX3XO00571 662 aaKnown RBP eCLIP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SART1O43290 800 aaKnown RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 GJB6O95452 261 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 OPRD1P41143 372 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SEC13P55735 322 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 RNASE9P60153 205 aaKnown RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 COG7P83436 770 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 TBX2Q13207 712 aaPredicted RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 MSANTD2Q6P1R3 559 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 WDR59Q6PJI9 974 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 DEFB106AQ8N104 65 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SYNPOQ8N3V7 929 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 DQX1Q8TE96 717 aaKnown RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SYN2Q92777 582 aaPredicted RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 IQCDQ96DY2 449 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 ADAM33Q9BZ11 813 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 SPHK2Q9NRA0 654 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 OLA1Q9NTK5 396 aaKnown RBP16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 PYCARDQ9ULZ3 195 aa16.35■□□□□ 0.21
CLK3P2-201ENST00000427566 CAPN9O14815 690 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 TFE3P19532 575 aaPredicted RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 CORO1AP31146 461 aaKnown RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 NBL1P41271 181 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 NSFP46459 744 aaKnown RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 GAB4Q2WGN9 574 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 TDRD12Q587J7 1177 aaKnown RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 DCAF6Q58WW2 860 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 EFHC1Q5JVL4 640 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 FAM102AQ5T9C2 384 aaPredicted RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 TRNP1Q6NT89 227 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 PKN3Q6P5Z2 889 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 ZC3H14Q6PJT7 736 aaKnown RBP16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 Q6ZNB5 142 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 MON1BQ7L1V2 547 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 SLC26A9Q7LBE3 791 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 TAC4Q86UU9 113 aa16.34■□□□□ 0.21
CLK3P2-201ENST00000427566 C12orf40Q86WS4 652 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms