RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GYPCP04921 128 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ACOT2P49753 483 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 FIGNQ5HY92 759 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 CHST13Q8NET6 341 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RPRD1AQ96P16 312 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF184Q99676 751 aaPredicted RBP14.81□□□□□ -0.04
PTPN13-203ENST00000427191 CPNE1Q99829 537 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 MYO10Q9HD67 2058 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 C1orf232A0A0U1RR37 186 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 MTF1Q14872 753 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 B3GNT6Q6ZMB0 384 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 FAM228AQ86W67 206 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 LRRC34Q8IZ02 419 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 KBTBD8Q8NFY9 601 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 RAET1EQ8TD07 263 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 BTBD10Q9BSF8 475 aa14.81□□□□□ -0.04
PTPN13-203ENST00000427191 SKAP2O75563 359 aaPredicted RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 RPS6KA4O75676 772 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CACNA2D1P54289 1103 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CSNK2BP67870 215 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 PUDPQ08623 228 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 THOC7Q6I9Y2 204 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 HEATR4Q86WZ0 1026 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 UBASH3BQ8TF42 649 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 MPP4Q96JB8 637 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 SMIM11AP58511 58 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 RPL10AP62906 217 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CACNB2Q08289 660 aaPredicted RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 PPIDQ08752 370 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 TC2NQ8N9U0 490 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 NMD3Q96D46 503 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 SPATA5L1Q9BVQ7 753 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 VANGL2Q9ULK5 521 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 NDUFAF1Q9Y375 327 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 TAF4O00268 1085 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 TPST1O60507 370 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 ASS1P00966 412 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 LGALS3BPQ08380 585 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 ZNF543Q08ER8 600 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 KYAT3Q6YP21 454 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 FBXO36Q8NEA4 188 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 OR6Y1Q8NGX8 325 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CRYL1Q9Y2S2 319 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 SPANXN3Q5MJ09 141 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 UBE2E3Q969T4 207 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 PAFAH2Q99487 392 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 PLAGL2Q9UPG8 496 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 ZBTB7AO95365 584 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CPA3P15088 417 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CASP4P49662 377 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 CCDC157Q569K6 752 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 LRRC74BQ6ZQY2 392 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 POMGNT2Q8NAT1 580 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 UTP15Q8TED0 518 aaKnown RBP14.8□□□□□ -0.04
PTPN13-203ENST00000427191 MYDGFQ969H8 173 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 MYLPFQ96A32 169 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 TBX20Q9UMR3 447 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 MGAT5Q09328 741 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 COLEC11Q9BWP8 271 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 NUAK2Q9H093 628 aa14.8□□□□□ -0.04
PTPN13-203ENST00000427191 C21orf2O43822 256 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 ATP6V1G2O95670 118 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 PRKCEQ02156 737 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 KCNMA1Q12791 1236 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 MPP3Q13368 585 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SCARA3Q6AZY7 606 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 IRGCQ6NXR0 463 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 PHACTR4Q8IZ21 702 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SLC39A8Q9C0K1 460 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 PCDH9Q9HC56 1237 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 PRDM8Q9NQV8 689 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 RPS6KA6Q9UK32 745 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 MTSS1LQ765P7 747 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SP8Q8IXZ3 490 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SERAC1Q96JX3 654 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SLC25A23Q9BV35 468 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 POLR1DQ9Y2S0 133 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 ATP9AO75110 1047 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 LDOC1O95751 146 aaPredicted RBP14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SNAPC2Q13487 334 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 TRIT1Q9H3H1 467 aaKnown RBP14.79□□□□□ -0.04
PTPN13-203ENST00000427191 GPRC5DQ9NZD1 345 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 CROTQ9UKG9 612 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 ZCCHC18P0CG32 403 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 CPA2P48052 419 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SMTNL2Q2TAL5 461 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 ESRP1Q6NXG1 681 aaKnown RBP14.79□□□□□ -0.04
PTPN13-203ENST00000427191 KCNB2Q92953 911 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 C1QTNF7Q9BXJ2 289 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 CYP3A43Q9HB55 503 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 KLHL1Q9NR64 748 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 IRAK3Q9Y616 596 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 A0A087X1B8 175 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 NR6A1Q15406 480 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 SMAD1Q15797 465 aaKnown RBP14.79□□□□□ -0.04
PTPN13-203ENST00000427191 CCNG2Q16589 344 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 BHLHB9Q6PI77 547 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 DEFB107AQ8IZN7 70 aa14.79□□□□□ -0.04
PTPN13-203ENST00000427191 STK40Q8N2I9 435 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms