RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 ADGRF1Q5T601 910 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 SLC47A2Q86VL8 602 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 SFTPA1Q8IWL2 248 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 ALLCQ8N6M5 410 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 TSTD1Q8NFU3 115 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 PPP1R13BQ96KQ4 1090 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 SERPINB11Q96P15 392 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 HHIPQ96QV1 700 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 LSM14BQ9BX40 385 aaKnown RBP19.26■□□□□ 0.67
MSH5-207ENST00000425703 VPS16Q9H269 839 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 LIMA1Q9UHB6 759 aaKnown RBP19.26■□□□□ 0.67
MSH5-207ENST00000425703 ZNF292O60281 2723 aa19.26■□□□□ 0.67
MSH5-207ENST00000425703 GFRA2O00451 464 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 AXIN1O15169 862 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 MSI1O43347 362 aaKnown RBP19.25■□□□□ 0.67
MSH5-207ENST00000425703 YWHAZP63104 245 aaKnown RBP19.25■□□□□ 0.67
MSH5-207ENST00000425703 LAIR1Q6GTX8 287 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 TXNDC5Q8NBS9 432 aaKnown RBP19.25■□□□□ 0.67
MSH5-207ENST00000425703 DQX1Q8TE96 717 aaKnown RBP19.25■□□□□ 0.67
MSH5-207ENST00000425703 GAB3Q8WWW8 586 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 FAM149B1Q96BN6 582 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 BPIFA3Q9BQP9 254 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 SLC2A11Q9BYW1 496 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 POPDC2Q9HBU9 364 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 ASNSD1Q9NWL6 643 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 TLR6Q9Y2C9 796 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 CEP83Q9Y592 693 aa19.25■□□□□ 0.67
MSH5-207ENST00000425703 MYOFQ9NZM1 2061 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 WDR87Q6ZQQ6 2873 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 KIAA1549LQ6ZVL6 1849 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 F8VZ95 297 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 TRIM24O15164 1050 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 KLF8O95600 359 aaPredicted RBP19.24■□□□□ 0.67
MSH5-207ENST00000425703 CYP11B1P15538 503 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 HOXC13P31276 330 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 TIE1P35590 1138 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 COPB1P53618 953 aaKnown RBP19.24■□□□□ 0.67
MSH5-207ENST00000425703 TBX4P57082 545 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 NCAPHQ15003 741 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 MPPE1Q53F39 396 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 EMC10Q5UCC4 262 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 RASSF3Q86WH2 238 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 CCDC33Q8N5R6 958 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 GPR161Q8N6U8 529 aaKnown RBP19.24■□□□□ 0.67
MSH5-207ENST00000425703 ZNF513Q8N8E2 541 aaPredicted RBP19.24■□□□□ 0.67
MSH5-207ENST00000425703 P2RY11Q96G91 374 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 CPXM1Q96SM3 734 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 GANQ9H2C0 597 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 POLR3BQ9NW08 1133 aaPredicted RBP19.24■□□□□ 0.67
MSH5-207ENST00000425703 PLK2Q9NYY3 685 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 NCDNQ9UBB6 729 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 NAALADL1Q9UQQ1 740 aa19.24■□□□□ 0.67
MSH5-207ENST00000425703 SGK1O00141 431 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 CAPN9O14815 690 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 RPP40O75818 363 aaKnown RBP19.23■□□□□ 0.67
MSH5-207ENST00000425703 ALDH1A2O94788 518 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
MSH5-207ENST00000425703 CDH5P33151 784 aaPredicted RBP19.23■□□□□ 0.67
MSH5-207ENST00000425703 PXNP49023 591 aaPredicted RBP19.23■□□□□ 0.67
MSH5-207ENST00000425703 SLC11A2P49281 568 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 E2F5Q15329 346 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 EFHC1Q5JVL4 640 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 MPP7Q5T2T1 576 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 ZDHHC17Q8IUH5 632 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 C1orf131Q8NDD1 294 aaKnown RBP19.23■□□□□ 0.67
MSH5-207ENST00000425703 DDI1Q8WTU0 396 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 BHMTQ93088 406 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 SLC39A13Q96H72 371 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 HSD3B7Q9H2F3 369 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 POLMQ9NP87 494 aaPredicted RBP19.23■□□□□ 0.67
MSH5-207ENST00000425703 GMEB2Q9UKD1 530 aa19.23■□□□□ 0.67
MSH5-207ENST00000425703 ANTXRLA6NF34 631 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 LGALS16A8MUM7 142 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 PRRT4C9JH25 899 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 NPC1O15118 1278 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 IRAK2O43187 625 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 ADAM23O75077 832 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 LSM8O95777 96 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 RETP07949 1114 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 HNRNPLP14866 589 aaKnown RBP eCLIP19.22■□□□□ 0.674e-7■■■■□ 21.7
MSH5-207ENST00000425703 CDK11BP21127 795 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 SYPL2Q5VXT5 272 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 RNF43Q68DV7 783 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 CAVIN1Q6NZI2 390 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 TMEM92Q6UXU6 159 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 PRR23BQ6ZRT6 265 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 TOGARAM2Q6ZUX3 1019 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 CEP68Q76N32 757 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 CACNA2D4Q7Z3S7 1137 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 PASD1Q8IV76 773 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 TMEM35BQ8NCS4 154 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 IPO4Q8TEX9 1081 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 TMA16Q96EY4 203 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 PIWIL1Q96J94 861 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 FCRL2Q96LA5 508 aaPredicted RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 DDX50Q9BQ39 737 aaKnown RBP19.22■□□□□ 0.67
MSH5-207ENST00000425703 HINFPQ9BQA5 517 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 HCN2Q9UL51 889 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 SIK3Q9Y2K2 1263 aa19.22■□□□□ 0.67
MSH5-207ENST00000425703 ACSL4O60488 711 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms