RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 FGF19O95750 216 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 GLI1P08151 1106 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 GBP1P32455 592 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 TNNT3P45378 269 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-202ENST00000425436 PIGHQ14442 188 aaPredicted RBP16.29■□□□□ 0.2
SHOX2-202ENST00000425436 HSP90B2PQ58FF3 399 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 GPR158Q5T848 1215 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 LRRC38Q5VT99 294 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SIX6OS1Q8N1H7 587 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 MAB21L3Q8N8X9 362 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 C3orf20Q8ND61 904 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 CLEC4CQ8WTT0 213 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 HSFY1Q96LI6 401 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 GCNAQ96QF7 691 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 CPXM1Q96SM3 734 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 NMUR1Q9HB89 426 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 TRPC7Q9HCX4 862 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 TRPM5Q9NZQ8 1165 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 SCML2Q9UQR0 700 aa16.29■□□□□ 0.2
SHOX2-202ENST00000425436 FAM92AA1XBS5 289 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 TMEM191CA6NGB0 347 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 E5RJQ4 531 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 ZBED1O96006 694 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 LAMP2P13473 410 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 CBX1P83916 185 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 PDCLQ13371 301 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 ZNF268Q14587 947 aaPredicted RBP16.28■□□□□ 0.2
SHOX2-202ENST00000425436 C2CD6Q53TS8 623 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 DCUN1D2Q6PH85 259 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 OTOP3Q7RTS5 596 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 SLC13A5Q86YT5 568 aaPredicted RBP16.28■□□□□ 0.2
SHOX2-202ENST00000425436 MRPS31Q92665 395 aaKnown RBP16.28■□□□□ 0.2
SHOX2-202ENST00000425436 BTBD6Q96KE9 485 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 PKNOX2Q96KN3 472 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 SLC4A5Q9BY07 1137 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 SLC46A2Q9BY10 475 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 MED4Q9NPJ6 270 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 FAM114A2Q9NRY5 505 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 FEZ2Q9UHY8 353 aaPredicted RBP16.28■□□□□ 0.2
SHOX2-202ENST00000425436 CDH7Q9ULB5 785 aa16.28■□□□□ 0.2
SHOX2-202ENST00000425436 A0A1W2PQH9 124 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 BHMG1C9JSJ3 638 aaPredicted RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 PHF2O75151 1096 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 PYGMP11217 842 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 RPL34P49207 117 aaKnown RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 DRG2P55039 364 aaKnown RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 FAM193AP78312 1265 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 ZNF211Q13398 564 aaPredicted RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 CYP1B1Q16678 543 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 ARHGAP15Q53QZ3 475 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 ALS2CLQ60I27 953 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 SCD5Q86SK9 330 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 TMEM110Q86TL2 294 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 FNIP1Q8TF40 1166 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 STK32AQ8WU08 396 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 SEC14L1Q92503 715 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 ACSF2Q96CM8 615 aaPredicted RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 C18orf8Q96DM3 657 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 NECAB3Q96P71 396 aaPredicted RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 SLC22A12Q96S37 553 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 DDX47Q9H0S4 455 aaKnown RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 SMG9Q9H0W8 520 aaKnown RBP16.27■□□□□ 0.2
SHOX2-202ENST00000425436 OSER1Q9NX31 292 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 PCYOX1Q9UHG3 505 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 NR2E1Q9Y466 385 aa16.27■□□□□ 0.2
SHOX2-202ENST00000425436 TCRBV5S1A1TA0A578 114 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 SIGLEC16A6NMB1 481 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 ERBB2P04626 1255 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 FNTAP49354 379 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 DR1Q01658 176 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 ACAP1Q15027 740 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 PTPN20Q4JDL3 420 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 PM20D1Q6GTS8 502 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 BHLHA9Q7RTU4 235 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 ADHFE1Q8IWW8 467 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 KATNAL2Q8IYT4 538 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 NIPA2Q8N8Q9 360 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 ARL14EPQ8N8R7 260 aaPredicted RBP16.26■□□□□ 0.19
SHOX2-202ENST00000425436 TDRD5Q8NAT2 981 aaKnown RBP16.26■□□□□ 0.19
SHOX2-202ENST00000425436 PDZD8Q8NEN9 1154 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 ZSCAN18Q8TBC5 510 aaPredicted RBP16.26■□□□□ 0.19
SHOX2-202ENST00000425436 IFT81Q8WYA0 676 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 TASP1Q9H6P5 420 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 CCSER2Q9H7U1 834 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 CNGB3Q9NQW8 809 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 TLR8Q9NR97 1041 aaKnown RBP16.26■□□□□ 0.19
SHOX2-202ENST00000425436 LIMD1Q9UGP4 676 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 NUDT5Q9UKK9 219 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 USTQ9Y2C2 406 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 MYO10Q9HD67 2058 aa16.26■□□□□ 0.19
SHOX2-202ENST00000425436 YJEFN3A6XGL0 299 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 E7ENQ6 273 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 PAPSS1O43252 624 aaPredicted RBP16.25■□□□□ 0.19
SHOX2-202ENST00000425436 TBX18O95935 607 aa16.25■□□□□ 0.19
SHOX2-202ENST00000425436 ZDHHC11BP0C7U3 371 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms