RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 POLE2P56282 527 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 NXPH1P58417 271 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 STK3Q13188 491 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 SRSF6Q13247 344 aaKnown RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 MAPRE1Q15691 268 aaKnown RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 NTRK3Q16288 839 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 SFMBT2Q5VUG0 894 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 BLOC1S2Q6QNY1 142 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 RBM44Q6ZP01 1051 aaKnown RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 ANKS1BQ7Z6G8 1248 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 HEATR4Q86WZ0 1026 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 TMEM86AQ8N2M4 240 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF366Q8N895 744 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 C9orf43Q8TAL5 461 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 IFI44Q8TCB0 444 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 SORCS1Q8WY21 1168 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 JAKMIP1Q96N16 626 aaKnown RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 OMDQ99983 421 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 SYT15Q9BQS2 421 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 CCSER2Q9H7U1 834 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 CHORDC1Q9UHD1 332 aaPredicted RBP6.68□□□□□ -1.34
SDCBP-203ENST00000424270 KCNG1Q9UIX4 513 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 L1RE1Q9UN81 338 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 PLA2G4CQ9UP65 541 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 KIAA1024Q9UPX6 916 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 DERAQ9Y315 318 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 PCDHGA8Q9Y5G5 932 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 PCDHGA4Q9Y5G9 962 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 SNX9Q9Y5X1 595 aa6.68□□□□□ -1.34
SDCBP-203ENST00000424270 A0A1B0GTL3 188 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 PMS2P1A4D2B8 440 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 CDRT15L2A8MXV6 281 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 F8VP50 259 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 H0YCG3 227 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 AGRPO00253 132 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 HCRTO43612 131 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 DIAPH2O60879 1101 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 RNASEH1O60930 286 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ATP2C2O75185 946 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 RNASEH2AO75792 299 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 CLSTN1O94985 981 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 CYBBP04839 570 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 IGHV4-34P06331 123 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ITGA2BP08514 1039 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 KRT7P08729 469 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 CKMT1AP12532 417 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 RPA1P27694 616 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 POLR2BP30876 1174 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 SLC5A2P31639 672 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 MCM7P33993 719 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 KRT2P35908 639 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 TRAPPC10P48553 1259 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ACOT2P49753 483 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 NOP14P78316 857 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 TFAMQ00059 246 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ZBTB16Q05516 673 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 MORC3Q14149 939 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 STAT4Q14765 748 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ZRSR1Q15695 479 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 GEN1Q17RS7 908 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 KRTAP21-3Q3LHN1 58 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ZNF776Q68DI1 518 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 NCEH1Q6PIU2 408 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 IGF2-ASQ6U949 168 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 CRTC1Q6UUV9 634 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 MAMDC2Q7Z304 686 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 KANSL1Q7Z3B3 1105 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 DSG4Q86SJ6 1040 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 FAM177A1Q8N128 213 aaPredicted RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 GOLGA1Q92805 767 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 GRAMD1AQ96CP6 724 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ESYT1Q9BSJ8 1104 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ERVMER34-1Q9H9K5 563 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 EPB41L5Q9HCM4 733 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 DDX19AQ9NUU7 478 aaKnown RBP6.67□□□□□ -1.34
SDCBP-203ENST00000424270 ELOVL2Q9NXB9 296 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 FBXL12Q9NXK8 326 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 DKK3Q9UBP4 350 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 LRWD1Q9UFC0 647 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 AGAP1Q9UPQ3 857 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 DNM3Q9UQ16 869 aa6.67□□□□□ -1.34
SDCBP-203ENST00000424270 CCDC187A0A096LP49 1063 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CDKL5O76039 1030 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 RTN3O95197 1032 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 ITGB3P05106 788 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 GP1BAP07359 652 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 PDGFRBP09619 1106 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 NUDT7P0C024 238 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 CISD3P0C7P0 127 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 JMJD7P0C870 316 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 MAPTP10636 758 aaKnown RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 LIPCP11150 499 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 GNLYP22749 145 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 PDIA3P30101 505 aaKnown RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 MLLT3P42568 568 aaPredicted RBP6.66□□□□□ -1.34
SDCBP-203ENST00000424270 UQCRFS1P47985 274 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 RXRGP48443 463 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 MFAP3P55082 362 aa6.66□□□□□ -1.34
SDCBP-203ENST00000424270 MLLT10P55197 1068 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms