RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 SUPT3HB4E1H0 165 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 SUPT3HO75486 399 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 ANXA11P50995 505 aaKnown RBP8.64□□□□□ -1.03
CHD7-201ENST00000423902 VCPP55072 806 aaKnown RBP8.64□□□□□ -1.03
CHD7-201ENST00000423902 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
CHD7-201ENST00000423902 ALS2CLQ60I27 953 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 TMEM161BQ8NDZ6 487 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 SMYD3Q9H7B4 428 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 ENDOD1O94919 500 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 TMEM253P0C7T8 217 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 CES1P23141 567 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 KRT20P35900 424 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 SERPINB9P50453 376 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 SLC6A3Q01959 620 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 TIMP1P01033 207 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 ELF2Q15723 593 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 TJP1Q07157 1748 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 ARID5BQ14865 1188 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 MTBPQ96DY7 904 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 DNAJC7Q99615 494 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 CDT1Q9H211 546 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 A0A088AWK7 358 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 ZNF10P21506 573 aaPredicted RBP8.64□□□□□ -1.03
CHD7-201ENST00000423902 WDR75Q8IWA0 830 aaKnown RBP8.64□□□□□ -1.03
CHD7-201ENST00000423902 PPP1R13LQ8WUF5 828 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 FAR2Q96K12 515 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 SPATA17Q96L03 361 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 VCX3AQ9NNX9 186 aa8.64□□□□□ -1.03
CHD7-201ENST00000423902 CASP4P49662 377 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 XRCC4Q13426 336 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 FSCBQ5H9T9 825 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ZC3H14Q6PJT7 736 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 RASGRP2Q7LDG7 609 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 LRRC40Q9H9A6 602 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 SPRP35270 261 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 KCNA1Q09470 495 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ZNF618Q5T7W0 954 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 SLC47A2Q86VL8 602 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ECHDC2Q86YB7 292 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 TKTL2Q9H0I9 626 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 CNGB3Q9NQW8 809 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 TLR5O60602 858 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 FAM131BQ86XD5 332 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 CCNJLQ8IV13 435 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 CHAMP1Q96JM3 812 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ZDHHC6Q9H6R6 413 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 MRPL40Q9NQ50 206 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 RGS18Q9NS28 235 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 PHF2O75151 1096 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 APOA4P06727 396 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 NR1I3Q14994 352 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 VARS2Q5ST30 1063 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 KLHL35Q6PF15 583 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 USP49Q70CQ1 688 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 PDZK1P1A8MUH7 402 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 CFLARO15519 480 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 AKAP3O75969 853 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 CLEC16AQ2KHT3 1053 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD7-201ENST00000423902 ZBED8Q8IZ13 594 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ETNPPLQ8TBG4 499 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 F8VZ95 297 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 FOXN3O00409 490 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 PBLDP30039 288 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 RAP1GDS1P52306 607 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 STAT4Q14765 748 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 TARBP2Q15633 366 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 FLCNQ8NFG4 579 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ZBTB45Q96K62 511 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 GPN3Q9UHW5 284 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 GABRQQ9UN88 632 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 TAF6LQ9Y6J9 622 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ATP9AO75110 1047 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 SOAT2O75908 522 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 AMD1P17707 334 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 LIG3P49916 1009 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 FXR1P51114 621 aaKnown RBP eCLIP8.63□□□□□ -1.03
CHD7-201ENST00000423902 ARHGDIAP52565 204 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 KCNT2Q6UVM3 1135 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 C16orf59Q7L2K0 433 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ANKRD52Q8NB46 1076 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 C1orf54Q8WWF1 131 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ACDQ96AP0 544 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 POLR1EQ9GZS1 481 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 WDR41Q9HAD4 459 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 GOLGA8TH3BQL2 631 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 FGFR1P11362 822 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 ZNF211Q13398 564 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 LYPLAL1Q5VWZ2 237 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 CENPPQ6IPU0 288 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 GDF6Q6KF10 455 aaPredicted RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 EFL1Q7Z2Z2 1120 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 TFAP2DQ7Z6R9 452 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 INTS7Q9NVH2 962 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 NDRG2Q9UN36 371 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 TRAF3IP3Q9Y228 551 aa8.63□□□□□ -1.03
CHD7-201ENST00000423902 DICER1Q9UPY3 1922 aaKnown RBP8.63□□□□□ -1.03
CHD7-201ENST00000423902 IGKV6D-41A0A0C4DH26 115 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms