RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 PXMP2Q9NR77 195 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF510Q9Y2H8 683 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 LY75O60449 1722 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 E9PBE3 544 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 K7ERI5 159 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 KLHL41O60662 606 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 CSDE1O75534 798 aaKnown RBP17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 SRGAP2CP0DJJ0 459 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 SRGAP2BP0DMP2 458 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 EMP3P54852 163 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 RPL26P61254 145 aaKnown RBP17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 TGFB2P61812 414 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 EMC2Q15006 297 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 C6orf52Q5T4I8 152 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 CYP4V2Q6ZWL3 525 aaPredicted RBP17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 CEP70Q8NHQ1 597 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 GSDMBQ8TAX9 411 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 GAB3Q8WWW8 586 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 SIGLEC10Q96LC7 697 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 NLRP4Q96MN2 994 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 NIF3L1Q9GZT8 377 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 GMEB1Q9Y692 573 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 ADGRA2Q96PE1 1338 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 DOCK5Q9H7D0 1870 aa17.2■□□□□ 0.34
NPC1L1-203ENST00000423141 PIK3R2O00459 728 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 COX4I1P13073 169 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 MRPS22P82650 360 aaKnown RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 PDE1CQ14123 709 aaPredicted RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 PPP6R3Q5H9R7 873 aaPredicted RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 WDR78Q5VTH9 848 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 ARHGEF16Q5VV41 709 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 ZBTB33Q86T24 672 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 FNIP1Q8TF40 1166 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 SIKE1Q9BRV8 207 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 MRPL1Q9BYD6 325 aaKnown RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 GPATCH2LQ9NWQ4 482 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 PSMD13Q9UNM6 376 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 HEMK1Q9Y5R4 338 aaPredicted RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 AK5Q9Y6K8 562 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 ANKRD31Q8N7Z5 1873 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 F5H423 210 aaPredicted RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 TPP1O14773 563 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 PLIN3O60664 434 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 PRKCGP05129 697 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 ATXN3P54252 364 aaPredicted RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 TMED1Q13445 227 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 ACBD5Q5T8D3 534 aaPredicted RBP17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 KLC3Q6P597 504 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 RNPEPQ9H4A4 650 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 TMOD2Q9NZR1 351 aa17.19■□□□□ 0.34
NPC1L1-203ENST00000423141 H3BSA7 217 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 METTL18O95568 372 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 CCDC166P0CW27 439 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 TPP2P29144 1249 aaPredicted RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 POLR2BP30876 1174 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 ADARP55265 1226 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 CDKL1Q00532 357 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 CDO1Q16878 200 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 C15orf59Q2T9L4 293 aaPredicted RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 PPM1JQ5JR12 505 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 PLD5Q8N7P1 536 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 SNRNP27Q8WVK2 155 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 CATSPER2Q96P56 530 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 MRPS26Q9BYN8 205 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 DNAJC28Q9NX36 388 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 ATP6V1G1O75348 118 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 ZBED1O96006 694 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 HMGCRP04035 888 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 NPR1P16066 1061 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 ASPAP45381 313 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 YWHAEP62258 255 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 CRADDP78560 199 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 VPS72Q15906 364 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 TRNP1Q6NT89 227 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 LILRA2Q8N149 483 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 DEPTORQ8TB45 409 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 APBB2Q92870 758 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 EBNA1BP2Q99848 306 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 KLC2Q9H0B6 622 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 STN1Q9H668 368 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 ZNF358Q9NW07 568 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 PIH1D1Q9NWS0 290 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 CIDEBQ9UHD4 219 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 ARHGAP26Q9UNA1 814 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 DMTF1Q9Y222 760 aa17.18■□□□□ 0.34
NPC1L1-203ENST00000423141 STRNO43815 780 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 SERPINE1P05121 402 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 DESP17661 470 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PRKG1Q13976 671 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 UBR3Q6ZT12 1888 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 AMIGO2Q86SJ2 522 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 GALNT4Q8N4A0 578 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 AGR3Q8TD06 166 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 PPP4R1Q8TF05 950 aa17.17■□□□□ 0.34
NPC1L1-203ENST00000423141 CLMNQ96JQ2 1002 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms