RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 WEE2P0C1S8 567 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 DDX6P26196 483 aaKnown RBP eCLIP5.58□□□□□ -1.52
SFXN1-202ENST00000421887 HSD3B2P26439 372 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 CASRP41180 1078 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 FNTBP49356 437 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 KIF11P52732 1056 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 KRT17Q04695 432 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 USH1GQ495M9 461 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 TAF2Q6P1X5 1199 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 CCDC149Q6ZUS6 474 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 ASB10Q8WXI3 467 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 FRAT1Q92837 279 aaPredicted RBP5.58□□□□□ -1.52
SFXN1-202ENST00000421887 ZNF669Q96BR6 464 aaPredicted RBP5.58□□□□□ -1.52
SFXN1-202ENST00000421887 EXOC2Q96KP1 924 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 MAGEB10Q96LZ2 347 aaPredicted RBP5.58□□□□□ -1.52
SFXN1-202ENST00000421887 SRPK1Q96SB4 655 aaKnown RBP5.58□□□□□ -1.52
SFXN1-202ENST00000421887 RMDN3Q96TC7 470 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 NACAP1Q9BZK3 213 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 PUS7LQ9H0K6 701 aaKnown RBP5.58□□□□□ -1.52
SFXN1-202ENST00000421887 IL1RAPL2Q9NP60 686 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 ACSS2Q9NR19 701 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 SETD4Q9NVD3 440 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 SIRPGQ9P1W8 387 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 IGSF9Q9P2J2 1179 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 CDH22Q9UJ99 828 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 RAB23Q9ULC3 237 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 PCDHB7Q9Y5E2 793 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 CACNA1IQ9P0X4 2223 aa5.58□□□□□ -1.52
SFXN1-202ENST00000421887 PLIN4Q96Q06 1357 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 CHD6Q8TD26 2715 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 TBKBP1A7MCY6 615 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 GGPS1O95749 300 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 CHRNA1P02708 482 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 DCNP07585 359 aaKnown RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 ITGAMP11215 1152 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 SCG2P13521 617 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 MPLP40238 635 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 BCAR1P56945 870 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 KRTAP10-6P60371 365 aaPredicted RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 NHLH2Q02577 135 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 SSRP1Q08945 709 aaKnown RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 SLFN5Q08AF3 891 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 SERINC3Q13530 473 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 KCNC3Q14003 757 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 LPIN1Q14693 890 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 HSDL1Q3SXM5 330 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 CELF3Q5SZQ8 465 aaKnown RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 RARS2Q5T160 578 aaKnown RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 RNF187Q5TA31 235 aaPredicted RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 KIAA1841Q6NSI8 718 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 TSHZ1Q6ZSZ6 1077 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 MRPS27Q92552 414 aaKnown RBP5.57□□□□□ -1.52
SFXN1-202ENST00000421887 SLC9A6Q92581 669 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 ZNF778Q96MU6 729 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 TAAR1Q96RJ0 339 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 C16orf70Q9BSU1 422 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 DHRS4Q9BTZ2 278 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 BOCQ9BWV1 1114 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 ENKD1Q9H0I2 346 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 BOLA2Q9H3K6 86 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 TBC1D17Q9HA65 648 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 CA14Q9ULX7 337 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 LZTS1Q9Y250 596 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 EXOC6BQ9Y2D4 811 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 PCDHGA2Q9Y5H1 932 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 USP24Q9UPU5 2620 aa5.57□□□□□ -1.52
SFXN1-202ENST00000421887 DENND4AQ7Z401 1863 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 WDR19Q8NEZ3 1342 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 NRCAMQ92823 1304 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 SALL3Q9BXA9 1300 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 GSG1L2A8MUP6 293 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 HIDE1A8MVS5 230 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 SLC30A4O14863 429 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 RANBP6O60518 1105 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 FSBPO95073 299 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 LGALS2P05162 132 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 RPLP2P05387 115 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 PROS1P07225 676 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 HSPD1P10809 573 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 MYCLP12524 364 aaPredicted RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 PPM1AP35813 382 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 IGBP1P78318 339 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 BLOC1S1P78537 153 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 SMC1AQ14683 1233 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 MAN2A1Q16706 1144 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 ZNF528Q3MIS6 628 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 TMEM177Q53S58 311 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 FBXO47Q5MNV8 452 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 IL31Q6EBC2 164 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 BTNL9Q6UXG8 535 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 IGSF22Q8N9C0 903 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 Q8N9P0 234 aaPredicted RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 COLGALT1Q8NBJ5 622 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 LMBR1Q8WVP7 490 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 STRBPQ96SI9 672 aaKnown RBP5.56□□□□□ -1.52
SFXN1-202ENST00000421887 MAF1Q9H063 256 aa5.56□□□□□ -1.52
SFXN1-202ENST00000421887 FBXO4Q9UKT5 387 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms