RNA–Protein interactions for RNA: ENST00000421324.4

AC012560.1-202, humanhuman

TSL 1 (best) BASIC

Gene AC012560.1, Length 535 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012560.1-202ENST00000421324 TMEM176AQ96HP8 235 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 NT5C1BQ96P26 610 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 LRRC3BQ96PB8 259 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 TWNKQ96RR1 684 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 SMOQ99835 787 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 ARID3AQ99856 593 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 DDX23Q9BUQ8 820 aaKnown RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 FOXQ1Q9C009 403 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 FBXO44Q9H4M3 255 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 C8orf33Q9H7E9 229 aaPredicted RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 CSNK1G1Q9HCP0 422 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 CHORDC1Q9UHD1 332 aaPredicted RBP7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 SALL4Q9UJQ4 1053 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 PIAS3Q9Y6X2 628 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 C5orf42Q9H799 3197 aa7.99□□□□□ -1.13
AC012560.1-202ENST00000421324 MUC3AQ02505 3323 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 ZDBF2Q9HCK1 2354 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 C2orf78A6NCI8 922 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 TADA3O75528 432 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 BEST1O76090 585 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 AFPP02771 609 aaKnown RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 CD19P15391 556 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 ERCC5P28715 1186 aaPredicted RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 MAGEA9P43362 315 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC5A3P53794 718 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 RAD23BP54727 409 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 SETDB1Q15047 1291 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 PDGFRLQ15198 375 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 RSPO4Q2I0M5 234 aaPredicted RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 ITPRIPL2Q3MIP1 535 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 CT47A1Q5JQC4 288 aaPredicted RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 HECTD3Q5T447 861 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 ADAMTSL4Q6UY14 1074 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 RALGPS2Q86X27 583 aaPredicted RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM114A1Q8IWE2 563 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 TRIM59Q8IWR1 403 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 CCDC105Q8IYK2 499 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 CACTIN-AS1Q8N1I8 211 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 PPM1KQ8N3J5 372 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 IL22RA1Q8N6P7 574 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 PRSS33Q8NF86 280 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 SCAMP5Q8TAC9 235 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 TTC8Q8TAM2 541 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 SH3RF2Q8TEC5 729 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 ATOH1Q92858 354 aaPredicted RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 MSANTD3Q96H12 275 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 ZFYVE19Q96K21 471 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 DUSP16Q9BY84 665 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 NACA2Q9H009 215 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 CHRDQ9H2X0 955 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 LTB4R2Q9NPC1 389 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 TMEM30AQ9NV96 361 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 DUS2Q9NX74 493 aaKnown RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 IL37Q9NZH6 218 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 GCNT4Q9P109 453 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 HESX1Q9UBX0 185 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 KIAA1257Q9ULG3 409 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 NDRG2Q9UN36 371 aaKnown RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 CCL26Q9Y258 94 aa7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 MTF2Q9Y483 593 aaPredicted RBP7.98□□□□□ -1.13
AC012560.1-202ENST00000421324 H0Y858 1186 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 ARNTLO00327 626 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 MBL2P11226 248 aaPredicted RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 VDRP11473 427 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 PCSK2P16519 638 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 ACO1P21399 889 aaKnown RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 PLA2G5P39877 138 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 MTIF2P46199 727 aaKnown RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 IFNAR2P48551 515 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC7A9P82251 487 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 NHLH1Q02575 133 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 TNK2Q07912 1038 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 TCF15Q12870 199 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 ZNF211Q13398 564 aaPredicted RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 RUNX3Q13761 415 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 MTF1Q14872 753 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 SGO2Q562F6 1265 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 ARHGAP17Q68EM7 881 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 IGF2-ASQ6U949 168 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 CLEC20AQ6ZU45 233 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 DDX42Q86XP3 938 aaKnown RBP eCLIP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 ANKRD52Q8NB46 1076 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC4A11Q8NBS3 891 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 ZMIZ2Q8NF64 920 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 LMO3Q8TAP4 145 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 EXOC4Q96A65 974 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 JAKMIP2Q96AA8 810 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 CLDN23Q96B33 292 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 CNOT6LQ96LI5 555 aaKnown RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 SLC22A12Q96S37 553 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 FAM83CQ9BQN1 747 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 SSBP4Q9BWG4 385 aaPredicted RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 UBXN6Q9BZV1 441 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 RNF38Q9H0F5 515 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 RASSF4Q9H2L5 321 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 EBF3Q9H4W6 596 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 LMAN1LQ9HAT1 526 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 PNPLA8Q9NP80 782 aa7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 TLR8Q9NR97 1041 aaKnown RBP7.97□□□□□ -1.13
AC012560.1-202ENST00000421324 SPATA6Q9NWH7 488 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms