RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KRT38O76015 456 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 PDE5AO76074 875 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 MGAT1P26572 445 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 MLH1P40692 756 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 PDE1BQ01064 536 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 NME3Q13232 169 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 SOWAHAQ2M3V2 549 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 C1orf146Q5VVC0 180 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 AZIN2Q96A70 460 aa12.3□□□□□ -0.44
LIMK1-202ENST00000418310 ZMAT2Q96NC0 199 aaKnown RBP12.3□□□□□ -0.44
LIMK1-202ENST00000418310 HMX2A2RU54 273 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LINGO3P0C6S8 592 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 DHRS4L1P0CG22 281 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ZCCHC18P0CG32 403 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LMO2P25791 158 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ADCYAP1R1P41586 468 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 RBP5P82980 135 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 STX3Q13277 289 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 FASTKD1Q53R41 847 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LGSNQ5TDP6 509 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 OLFML1Q6UWY5 402 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LRRC74BQ6ZQY2 392 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 SH2D5Q6ZV89 423 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 CMC1Q7Z7K0 106 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 SPNS2Q8IVW8 549 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 STKLD1Q8NE28 680 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 VPS33BQ9H267 617 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 GBA2Q9HCG7 927 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 SSU72Q9NP77 194 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 BATF3Q9NR55 127 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ERAP1Q9NZ08 941 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 GPRC5DQ9NZD1 345 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 POLR2AP24928 1970 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 SSC5DA1L4H1 1573 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 TPP1O14773 563 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LGALS2P05162 132 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ERVK-10P10266 1014 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 NCF2P19878 526 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ATP6V1C1P21283 382 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 N4BP2L1Q5TBK1 243 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 PGBD4Q96DM1 585 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 EIF2AQ9BY44 585 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 UNKQ9C0B0 810 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 MAN1C1Q9NR34 630 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 CNTN3Q9P232 1028 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LNPEPQ9UIQ6 1025 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 BRCA2P51587 3418 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LCTP09848 1927 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 LUC7L3O95232 432 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 C6orf222P0C671 652 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ACAT1P24752 427 aaKnown RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 VHLP40337 213 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 BAG6P46379 1132 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 BOLA3Q53S33 107 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 RNF220Q5VTB9 566 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 ZNF534Q76KX8 674 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 KBTBD2Q8IY47 623 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 TNS4Q8IZW8 715 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 KCTD15Q96SI1 283 aaPredicted RBP12.29□□□□□ -0.44
LIMK1-202ENST00000418310 PHACTR1Q9C0D0 580 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 PIDD1Q9HB75 910 aa12.29□□□□□ -0.44
LIMK1-202ENST00000418310 DOCK1Q14185 1865 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 FZD9O00144 591 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 MYCNP04198 464 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 ATXN3P54252 364 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 ATG16L1Q676U5 607 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 LCLAT1Q6UWP7 414 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 CHSY1Q86X52 802 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 ADGRF2Q8IZF7 708 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 GSTCDQ8NEC7 633 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 NLGN2Q8NFZ4 835 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 GSDMBQ8TAX9 411 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 CXorf38Q8TB03 319 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 PYDC1Q8WXC3 89 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 SIGLEC10Q96LC7 697 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 TBCBQ99426 244 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 XAB2Q9HCS7 855 aaKnown RBP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 PNPOQ9NVS9 261 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 RBPJLQ9UBG7 517 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 SCN1AP35498 2009 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 SPECC1L-ADORA2AF8WAN1 911 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 CLDN5O00501 218 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 LGR5O75473 907 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 C1QAP02745 245 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 RARBP10826 455 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 VAV1P15498 845 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 KLC1Q07866 573 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 RALGPS1Q5JS13 557 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 THEMIS2Q5TEJ8 643 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 PPFIBP2Q8ND30 876 aa12.28□□□□□ -0.44
LIMK1-202ENST00000418310 KHSRPQ92945 711 aaKnown RBP eCLIP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 EBNA1BP2Q99848 306 aaKnown RBP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 FRMD8P1Q9BZ68 369 aaPredicted RBP12.28□□□□□ -0.44
LIMK1-202ENST00000418310 UBP1Q9NZI7 540 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms