RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, human

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BDNF-208	ENST00000418212	BMT2	Q1RMZ1	405 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	SDHAF4	Q5VUM1	108 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	CACUL1	Q86Y37	369 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	SOCS4	Q8WXH5	440 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	PHF21B	Q96EK2	531 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	PKD2L2	Q9NZM6	624 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	SALL4	Q9UJQ4	1053 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	BUD23	O43709	281 aa	Known RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	RAMP2	O60895	175 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	USP2	O75604	605 aa	Predicted RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	SRP72	O76094	671 aa	Known RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	UBOX5	O94941	541 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	RHOC	P08134	193 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	CD52	P31358	61 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ARHGDIA	P52565	204 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ITGA9	Q13797	1035 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	LENG1	Q96BZ8	264 aa	Predicted RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	TUBGCP3	Q96CW5	907 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	SMARCD1	Q96GM5	515 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	WNK4	Q96J92	1243 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ZFP42	Q96MM3	310 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	DNAJC16	Q9Y2G8	782 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ACOT9	Q9Y305	439 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	PCDHB5	Q9Y5E4	795 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	BCL9L	Q86UU0	1499 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	WDR27	A2RRH5	827 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	CFAP99	D6REC4	459 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	APOC4-APOC2	K7ER74	178 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	PRPF4	O43172	522 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	APOC2	P02655	101 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	MYL4	P12829	197 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	SCTR	P47872	440 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	PLK1	P53350	603 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	TBX4	P57082	545 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	LRRC74A	Q0VAA2	488 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ZCCHC23	Q6ZST2	131 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	MTDH	Q86UE4	582 aa	Known RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	C18orf25	Q96B23	403 aa	Predicted RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	TRIM15	Q9C019	465 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	COG4	Q9H9E3	785 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	PTPRH	Q9HD43	1115 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	DSE	Q9UL01	958 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	TRPV2	Q9Y5S1	764 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	UMODL1	Q5DID0	1318 aa		13.6	□□□□□ -0.23
BDNF-208	ENST00000418212	ROBO3	Q96MS0	1386 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	NT5C1B-RDH14	C9J2C7	533 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212		E9PBE3	544 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	MGEA5	O60502	916 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	KLHL41	O60662	606 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	GLRA3	O75311	464 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	MYO1D	O94832	1006 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	SHBG	P04278	402 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	KCNA4	P22459	653 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	FLT3LG	P49771	235 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	POU4F1	Q01851	419 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	BTK	Q06187	659 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	MAPRE2	Q15555	327 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	TBCC	Q15814	346 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	AGGF1	Q8N302	714 aa	eCLIP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	GALNT4	Q8N4A0	578 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	SERBP1	Q8NC51	408 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	PPP2R3C	Q969Q6	453 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	ERLEC1	Q96DZ1	483 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	FAM129A	Q9BZQ8	928 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	BRD8	Q9H0E9	1235 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	GPAM	Q9HCL2	828 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	NMRK2	Q9NPI5	230 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	SIGLEC16	A6NMB1	481 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	C2orf81	A6NN90	581 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	BTBD19	C9JJ37	291 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	FANCG	O15287	622 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	KPNA6	O60684	536 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	NOL4	O94818	638 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	TRIM16	O95361	564 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	SERPINB5	P36952	375 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	NCKAP1L	P55160	1127 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	MAP2K5	Q13163	448 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	POLD3	Q15054	466 aa	Predicted RBP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	HGSNAT	Q68CP4	663 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	FAM183BP	Q6ZVS7	135 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	RNF168	Q8IYW5	571 aa	Predicted RBP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	MSL3	Q8N5Y2	521 aa	Known RBP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	CMTM5	Q96DZ9	223 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	SNRNP25	Q9BV90	132 aa	Known RBP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	ST3GAL5	Q9UNP4	418 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	SPDYE5	A6NIY4	337 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212		A8MX80	341 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	TIMM44	O43615	452 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	BANF1	O75531	89 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	TRUB2	O95900	331 aa	Known RBP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	RHOA	P61586	193 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	MGAT5	Q09328	741 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	FAAP100	Q0VG06	881 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	RRP1B	Q14684	758 aa	Known RBP	13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	KBTBD12	Q3ZCT8	623 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	PLPPR4	Q7Z2D5	763 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	JOSD2	Q8TAC2	188 aa		13.59	□□□□□ -0.23
BDNF-208	ENST00000418212	NSL1	Q96IY1	281 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms