RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CORO1CQ9ULV4 474 aaPredicted RBP14.97□□□□□ -0.01
HDAC9-208ENST00000417496 MYO18AQ92614 2054 aaKnown RBP14.97□□□□□ -0.01
HDAC9-208ENST00000417496 DNAJC25-GNG10A0A024R161 153 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 A6NHS1 94 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 MAP3K13O43283 966 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 GOT1P17174 413 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 KCNA4P22459 653 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 GCKP35557 465 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 MAGEA3P43357 314 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 SESN2P58004 480 aaPredicted RBP14.97□□□□□ -0.01
HDAC9-208ENST00000417496 CES3Q6UWW8 571 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 ATG14Q6ZNE5 492 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 STKLD1Q8NE28 680 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 THTPAQ9BU02 230 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 APOL6Q9BWW8 343 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 SLC4A5Q9BY07 1137 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 YIPF3Q9GZM5 350 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 PSAT1Q9Y617 370 aa14.97□□□□□ -0.01
HDAC9-208ENST00000417496 TRIP11Q15643 1979 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 SYNJ2BP-COX16A0A087WUM0 186 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 A6NJR5 290 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 FAM159BA6NKW6 160 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 MEI4A8MW99 385 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 LMO2P25791 158 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 SLC26A2P50443 739 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 OLIG2Q13516 323 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 TTLL4Q14679 1199 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 KIZQ2M2Z5 673 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 ATG16L1Q676U5 607 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 AFG1LQ8WV93 481 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 STMN2Q93045 179 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 ZNF670Q9BS34 389 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 SNTG2Q9NY99 539 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 DTLQ9NZJ0 730 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 COX16Q9P0S2 106 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 GJD2Q9UKL4 321 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 AP4E1Q9UPM8 1137 aa14.96□□□□□ -0.01
HDAC9-208ENST00000417496 SPDYE5A6NIY4 337 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 NPTXRO95502 500 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 GSRP00390 522 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 LMNAP02545 664 aaKnown RBP14.96□□□□□ -0.02
HDAC9-208ENST00000417496 BPGMP07738 259 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 VAV1P15498 845 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 VHLP40337 213 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 CCNFP41002 786 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 RPL10AP62906 217 aaKnown RBP14.96□□□□□ -0.02
HDAC9-208ENST00000417496 SLC34A1Q06495 639 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 ARHGAP1Q07960 439 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 FAM187BQ17R55 369 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 TSNAXIP1Q2TAA8 658 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 ZNF618Q5T7W0 954 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 LRRC74BQ6ZQY2 392 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 FAM131BQ86XD5 332 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 CRLF3Q8IUI8 442 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 TEKT4Q8WW24 435 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 CSPG4P5Q96PW8 444 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 KCTD15Q96SI1 283 aaPredicted RBP14.96□□□□□ -0.02
HDAC9-208ENST00000417496 NFKBIZQ9BYH8 718 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 RPL26L1Q9UNX3 145 aaKnown RBP14.96□□□□□ -0.02
HDAC9-208ENST00000417496 HBS1LQ9Y450 684 aaKnown RBP14.96□□□□□ -0.02
HDAC9-208ENST00000417496 SCN1AP35498 2009 aa14.96□□□□□ -0.02
HDAC9-208ENST00000417496 A0A0G2JLL6 359 aaPredicted RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 DPYSL4O14531 572 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 MDM4O15151 490 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 ALDOAP04075 364 aaKnown RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 MAGEA6P43360 314 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 STX3Q13277 289 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 FASTKD1Q53R41 847 aaKnown RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 PPM1JQ5JR12 505 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 HEATR6Q6AI08 1181 aaKnown RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 PRRT2Q7Z6L0 340 aaPredicted RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 TP53INP2Q8IXH6 220 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 KBTBD2Q8IY47 623 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 PPP1R14CQ8TAE6 165 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 SH3TC2Q8TF17 1288 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 MPHOSPH6Q99547 160 aaKnown RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 SHCBP1LQ9BZQ2 653 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 C2CD2Q9Y426 696 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 ENO4A6NNW6 628 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 A8MXQ7 604 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 GCATO75600 419 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 IL1BP01584 269 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 ACADSP16219 412 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 CRHR1P34998 444 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 BAG6P46379 1132 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 GTF2A2P52657 109 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 PITX1P78337 314 aaPredicted RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 TMEM154Q6P9G4 183 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 EP400NLQ6ZTU2 488 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 CDKL3Q8IVW4 592 aaPredicted RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 LMNTD2Q8IXW0 634 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 MCUQ8NE86 351 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 ZNF778Q96MU6 729 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 TBCBQ99426 244 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 EIF2AQ9BY44 585 aaKnown RBP14.95□□□□□ -0.02
HDAC9-208ENST00000417496 MOCS1Q9NZB8 636 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 KIAA1257Q9ULG3 409 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 PCDHA11Q9Y5I1 949 aa14.95□□□□□ -0.02
HDAC9-208ENST00000417496 PAPPA2Q9BXP8 1791 aa14.94□□□□□ -0.02
HDAC9-208ENST00000417496 TPP1O14773 563 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms