RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TAF4BQ92750 862 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 TWNKQ96RR1 684 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 IMPG2Q9BZV3 1241 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 THAP9Q9H5L6 903 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 IL21RQ9HBE5 538 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 TRPM5Q9NZQ8 1165 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 CFAP97Q9P2B7 532 aa18.93■□□□□ 0.62
VCP-202ENST00000417448 MUC22E2RYF6 1773 aaPredicted RBP18.93■□□□□ 0.62
VCP-202ENST00000417448 TBC1D3BA6NDS4 549 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.92■□□□□ 0.62
VCP-202ENST00000417448 KCNJ18B7U540 433 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 CLDN5O00501 218 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 SLC9A3R1O14745 358 aaPredicted RBP18.92■□□□□ 0.62
VCP-202ENST00000417448 TRIM24O15164 1050 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 PTPN1P18031 435 aaKnown RBP18.92■□□□□ 0.62
VCP-202ENST00000417448 MAGEA11P43364 429 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 CAMK2BQ13554 666 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 KCNJ12Q14500 433 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 FAM171BQ6P995 826 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 ACOT1Q86TX2 421 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 AOPEPQ8N6M6 819 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 ENOX1Q8TC92 643 aaKnown RBP18.92■□□□□ 0.62
VCP-202ENST00000417448 KAT5Q92993 513 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 SPATA17Q96L03 361 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 UBL7Q96S82 380 aaPredicted RBP18.92■□□□□ 0.62
VCP-202ENST00000417448 ACOX2Q99424 681 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 FUCA2Q9BTY2 467 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 NIF3L1Q9GZT8 377 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 SLC6A17Q9H1V8 727 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 CDH9Q9ULB4 789 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 COQ4Q9Y3A0 265 aa18.92■□□□□ 0.62
VCP-202ENST00000417448 KNL1Q8NG31 2342 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 TRABD2BA6NFA1 517 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 TULP3O75386 442 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 OAS1P00973 400 aaKnown RBP18.91■□□□□ 0.62
VCP-202ENST00000417448 ATXN1LP0C7T5 689 aaKnown RBP18.91■□□□□ 0.62
VCP-202ENST00000417448 PTMSP20962 102 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 PCSK1P29120 753 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 CYP27A1Q02318 531 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 ZNF394Q53GI3 561 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 C10orf76Q5T2E6 689 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 DENND5BQ6ZUT9 1274 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 ARHGEF19Q8IW93 802 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 SCUBE3Q8IX30 993 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 CCDC150Q8NCX0 1101 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 EHBP1Q8NDI1 1231 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 LMO3Q8TAP4 145 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 KCNV2Q8TDN2 545 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 SETD7Q8WTS6 366 aaKnown RBP18.91■□□□□ 0.62
VCP-202ENST00000417448 MYLPFQ96A32 169 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 TTLL2Q9BWV7 592 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 FAM124BQ9H5Z6 455 aaPredicted RBP18.91■□□□□ 0.62
VCP-202ENST00000417448 TAB2Q9NYJ8 693 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 MAGEC2Q9UBF1 373 aaPredicted RBP18.91■□□□□ 0.62
VCP-202ENST00000417448 PTPRQQ9UMZ3 2332 aa18.91■□□□□ 0.62
VCP-202ENST00000417448 CABIN1Q9Y6J0 2220 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 TMEM131Q92545 1883 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 ZNF217O75362 1048 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 CALCAP01258 141 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 P4HA1P13674 534 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 PRKCSHP14314 528 aaPredicted RBP18.9■□□□□ 0.62
VCP-202ENST00000417448 PLA2G2AP14555 144 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 BDNFP23560 247 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 NTSR1P30989 418 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 NCAPHQ15003 741 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 ZSCAN23Q3MJ62 389 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 EGFLAMQ63HQ2 1017 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 RRAGAQ7L523 313 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 TRMT11Q7Z4G4 463 aaKnown RBP18.9■□□□□ 0.62
VCP-202ENST00000417448 TERB1Q8NA31 727 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 IPO4Q8TEX9 1081 aaKnown RBP18.9■□□□□ 0.62
VCP-202ENST00000417448 SLC39A7Q92504 469 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 TUBGCP2Q9BSJ2 902 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 B3GNT5Q9BYG0 378 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 ELOVL4Q9GZR5 314 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 SUSD2Q9UGT4 822 aa18.9■□□□□ 0.62
VCP-202ENST00000417448 FAM149AA5PLN7 773 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 PES1O00541 588 aaKnown RBP18.89■□□□□ 0.61
VCP-202ENST00000417448 SLC9A1P19634 815 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 GRIK1P39086 918 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 CACNA2D1P54289 1103 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 BNC1Q01954 994 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 GAD2Q05329 585 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 SKOR2Q2VWA4 1001 aaPredicted RBP18.89■□□□□ 0.61
VCP-202ENST00000417448 TCP11X2Q5H9J9 407 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 CT47A1Q5JQC4 288 aaPredicted RBP18.89■□□□□ 0.61
VCP-202ENST00000417448 MIIPQ5JXC2 388 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 GJB7Q6PEY0 223 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 VSTM1Q6UX27 236 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 C12orf29Q8N999 325 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 B3GALNT2Q8NCR0 500 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 PIP4K2CQ8TBX8 421 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 PCED1BQ96HM7 432 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 ZFRQ96KR1 1074 aaKnown RBP18.89■□□□□ 0.61
VCP-202ENST00000417448 INTS2Q9H0H0 1204 aaKnown RBP18.89■□□□□ 0.61
VCP-202ENST00000417448 VPS16Q9H269 839 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 FAM49BQ9NUQ9 324 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 FNDC3AQ9Y2H6 1198 aaKnown RBP18.89■□□□□ 0.61
VCP-202ENST00000417448 MYO18BQ8IUG5 2567 aa18.89■□□□□ 0.61
VCP-202ENST00000417448 ATMQ13315 3056 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms