RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 APOC4-APOC2K7ER74 178 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 TEX28O15482 410 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 IRAK2O43187 625 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 APOC2P02655 101 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 ZSCAN5DPP0CG00 497 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 ETS1P14921 441 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 ATF2P15336 505 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 AMPD1P23109 780 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 CXCR3P49682 368 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 NRLP54845 237 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 VCPP55072 806 aaKnown RBP17.62■□□□□ 0.41
CALD1-204ENST00000417172 OASLQ15646 514 aaKnown RBP17.62■□□□□ 0.41
CALD1-204ENST00000417172 C9orf50Q5SZB4 431 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 FAM109BQ6ICB4 259 aaPredicted RBP17.62■□□□□ 0.41
CALD1-204ENST00000417172 ATL2Q8NHH9 583 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 SLC35B2Q8TB61 432 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 DPF3Q92784 378 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 SLCO2A1Q92959 643 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 RAD9AQ99638 391 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 ZMYND15Q9H091 742 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 RAB17Q9H0T7 212 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 ZBP1Q9H171 429 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 SMOC2Q9H3U7 446 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 WDCPQ9H6R7 721 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 AAASQ9NRG9 546 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 MRPL17Q9NRX2 175 aaKnown RBP17.62■□□□□ 0.41
CALD1-204ENST00000417172 HOMER3Q9NSC5 361 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 RASAL2Q9UJF2 1139 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 ZNF148Q9UQR1 794 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 NEU2Q9Y3R4 380 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 HEY1Q9Y5J3 304 aa17.62■□□□□ 0.41
CALD1-204ENST00000417172 APOL1O14791 398 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 TNNT3P45378 269 aaPredicted RBP17.61■□□□□ 0.41
CALD1-204ENST00000417172 GDF10P55107 478 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 RPL10AP62906 217 aaKnown RBP17.61■□□□□ 0.41
CALD1-204ENST00000417172 EIF4EBP2Q13542 120 aaPredicted RBP17.61■□□□□ 0.41
CALD1-204ENST00000417172 EFHC2Q5JST6 749 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 SLC9A4Q6AI14 798 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 ZC3H18Q86VM9 953 aaKnown RBP17.61■□□□□ 0.41
CALD1-204ENST00000417172 SP7Q8TDD2 431 aaPredicted RBP17.61■□□□□ 0.41
CALD1-204ENST00000417172 RNF139Q8WU17 664 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 RNF34Q969K3 372 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 SLC9A7Q96T83 725 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 RRN3Q9NYV6 651 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 GRHL1Q9NZI5 618 aa17.61■□□□□ 0.41
CALD1-204ENST00000417172 LILRB3O75022 631 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 RTN3O95197 1032 aaPredicted RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 GBE1Q04446 702 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 BEND5Q7L4P6 421 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 GSTA5Q7RTV2 222 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 RUNDC3BQ96NL0 473 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 LBHD1Q9BQE6 289 aaPredicted RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 HTATIP2Q9BUP3 242 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 FUT8Q9BYC5 575 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 ASIC3Q9UHC3 531 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 XPO7Q9UIA9 1087 aaKnown RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 YIPF1Q9Y548 306 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 ANAPC1Q9H1A4 1944 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 NUP205Q92621 2012 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 F9P00740 461 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 CNPP09543 421 aaKnown RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 RARGP13631 454 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 CTNNB1P35222 781 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 EIF3EP60228 445 aaKnown RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 SLC10A2Q12908 348 aaPredicted RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 RAB33AQ14088 237 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 TFDP2Q14188 446 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 SND1Q7KZF4 910 aaKnown RBP eCLIP17.6■□□□□ 0.41
CALD1-204ENST00000417172 P3H4Q92791 437 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 NKD2Q969F2 451 aaPredicted RBP17.6■□□□□ 0.41
CALD1-204ENST00000417172 NTAN1Q96AB6 310 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 C17orf80Q9BSJ5 609 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 TRIM62Q9BVG3 475 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 CCSER2Q9H7U1 834 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 ARHGEF4Q9NR80 690 aa17.6■□□□□ 0.41
CALD1-204ENST00000417172 OBSL1O75147 1896 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 CTSAP10619 480 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 DNAJB1P25685 340 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 ARL4AP40617 200 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 TUFMP49411 452 aaKnown RBP17.59■□□□□ 0.41
CALD1-204ENST00000417172 ERVFC1P60507 584 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 SCAPQ12770 1279 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 EFEMP1Q12805 493 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 CUL1Q13616 776 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 PTK6Q13882 451 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 NOMO1Q15155 1222 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 NCBP2-AS2Q69YL0 99 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 DRICH1Q6PGQ1 229 aaPredicted RBP17.59■□□□□ 0.41
CALD1-204ENST00000417172 ZDHHC24Q6UX98 284 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 ALLCQ8N6M5 410 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 GRK7Q8WTQ7 553 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
CALD1-204ENST00000417172 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.59■□□□□ 0.41
CALD1-204ENST00000417172 SGK1O00141 431 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 TP73O15350 636 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 GAS8O95995 478 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 MOCS2O96007 188 aaPredicted RBP17.59■□□□□ 0.41
CALD1-204ENST00000417172 KRT14P02533 472 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 RBP3P10745 1247 aa17.59■□□□□ 0.41
CALD1-204ENST00000417172 HMGA1P17096 107 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 150.6 ms