RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 FMO5P49326 533 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 CCZ1BP86790 482 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 CCZ1P86791 482 aaPredicted RBP21.44■■□□□ 1.02
PTPRU-203ENST00000415600 BST2Q10589 180 aaKnown RBP21.44■■□□□ 1.02
PTPRU-203ENST00000415600 EFEMP1Q12805 493 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 GOLGA7BQ2TAP0 167 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 PLA2G2CQ5R387 149 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 SCD5Q86SK9 330 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 PHTF2Q8N3S3 785 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 TSPAN16Q9UKR8 245 aa21.44■■□□□ 1.02
PTPRU-203ENST00000415600 MYOFQ9NZM1 2061 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 NCOR2Q9Y618 2525 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 KIAA1549LQ6ZVL6 1849 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 TCRBV21S2A2A0A5A6 115 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 DCLK1O15075 740 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 TEX33O43247 280 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 GREM1O60565 184 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 STC2O76061 302 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 FGFR1OPO95684 399 aaKnown RBP21.43■■□□□ 1.02
PTPRU-203ENST00000415600 CYBBP04839 570 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 SETSIPP0DME0 302 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 VDRP11473 427 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 NTSR1P30989 418 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 TKTL1P51854 596 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 YWHAGP61981 247 aaKnown RBP eCLIP21.43■■□□□ 1.02
PTPRU-203ENST00000415600 RAB41Q5JT25 222 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 PMS2CLQ68D20 193 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 TMEM92Q6UXU6 159 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 LPCAT2Q7L5N7 544 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 SIX6OS1Q8N1H7 587 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 RNF139Q8WU17 664 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 HMGB4Q8WW32 186 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 MARCH2Q9P0N8 246 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 NUDT5Q9UKK9 219 aa21.43■■□□□ 1.02
PTPRU-203ENST00000415600 ITIH6Q6UXX5 1313 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 SPTBN2O15020 2390 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 BCLAF3A2AJT9 711 aaKnown RBP21.42■■□□□ 1.02
PTPRU-203ENST00000415600 MDM4O15151 490 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 PAEPP09466 180 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 DGKGP49619 791 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 SF3A2Q15428 464 aaKnown RBP21.42■■□□□ 1.02
PTPRU-203ENST00000415600 STILQ15468 1287 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 Q6ZNB5 142 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 CYP2U1Q7Z449 544 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 CHPFQ8IZ52 775 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 WBP2Q969T9 261 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 TAB2Q9NYJ8 693 aa21.42■■□□□ 1.02
PTPRU-203ENST00000415600 HOXB2P14652 356 aa21.41■■□□□ 1.02
PTPRU-203ENST00000415600 MESP2Q0VG99 397 aa21.41■■□□□ 1.02
PTPRU-203ENST00000415600 SPDYCQ5MJ68 293 aa21.41■■□□□ 1.02
PTPRU-203ENST00000415600 EMC10Q5UCC4 262 aa21.41■■□□□ 1.02
PTPRU-203ENST00000415600 PLD4Q96BZ4 506 aa21.41■■□□□ 1.02
PTPRU-203ENST00000415600 NPC1O15118 1278 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 GDF9O60383 454 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 HARS2P49590 506 aaKnown RBP21.4■■□□□ 1.02
PTPRU-203ENST00000415600 PDE4CQ08493 712 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 CCDC6Q16204 474 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 PM20D1Q6GTS8 502 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 TMEM270Q6UE05 265 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 SFTPA1Q8IWL2 248 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 PPM1KQ8N3J5 372 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 OLIG1Q8TAK6 271 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 UCMAQ8WVF2 138 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 VPS16Q9H269 839 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 SPTLC3Q9NUV7 552 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 INVSQ9Y283 1065 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 PCDHB4Q9Y5E5 795 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 KHNYNO15037 678 aaKnown RBP21.4■■□□□ 1.02
PTPRU-203ENST00000415600 NRDCO43847 1150 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 ADAM23O75077 832 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 SKILP12757 684 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 CORO1AP31146 461 aaKnown RBP21.4■■□□□ 1.02
PTPRU-203ENST00000415600 P2RY2P41231 377 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 DHPSP49366 369 aaPredicted RBP21.4■■□□□ 1.02
PTPRU-203ENST00000415600 RNF43Q68DV7 783 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 GOLGA1Q92805 767 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 ULBP1Q9BZM6 244 aa21.4■■□□□ 1.02
PTPRU-203ENST00000415600 SLC12A8A0AV02 714 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 LGALS16A8MUM7 142 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 GFRA2O00451 464 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 ZNF217O75362 1048 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 ADIGQ0VDE8 80 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 PPM1JQ5JR12 505 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 STPG1Q5TH74 334 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 SLC36A4Q6YBV0 504 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 CCDC112Q8NEF3 446 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 KCTD13Q8WZ19 329 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 CNGB3Q9NQW8 809 aa21.39■■□□□ 1.01
PTPRU-203ENST00000415600 HBS1LQ9Y450 684 aaKnown RBP21.39■■□□□ 1.01
PTPRU-203ENST00000415600 EML5Q05BV3 1969 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 O00370 1275 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 TPM2P07951 284 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 HMBSP08397 361 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 STARD3Q14849 445 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 LCLAT1Q6UWP7 414 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 CREBRFQ8IUR6 639 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 DENND1CQ8IV53 801 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 BHMTQ93088 406 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 TUBGCP2Q9BSJ2 902 aa21.38■■□□□ 1.01
PTPRU-203ENST00000415600 ABCC13Q9NSE7 274 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms