RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 ZDHHC17Q8IUH5 632 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 LRRC71Q8N4P6 559 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 EFCAB3Q8N7B9 438 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 UBA3Q8TBC4 463 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 FGD4Q96M96 766 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 SLC13A1Q9BZW2 595 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 INO80BQ9C086 356 aaPredicted RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 FAM96AQ9H5X1 160 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 MOCS1Q9NZB8 636 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 PIM2Q9P1W9 311 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 HBP1O60381 514 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 FKBP6O75344 327 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 CSDE1O75534 798 aaKnown RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 APRTP07741 180 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 STAG3L1P0CL83 205 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 AOC1P19801 751 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 GMPRP36959 345 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 RPS6KA3P51812 740 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ALDH18A1P54886 795 aaKnown RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 ACTR3P61158 418 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 AP2B1P63010 937 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 IRX4P78413 519 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 C15orf59Q2T9L4 293 aaPredicted RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 CELF3Q5SZQ8 465 aaKnown RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 TMCO4Q5TGY1 634 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ARMC3Q5W041 872 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ISLR2Q6UXK2 745 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ADGRG6Q86SQ4 1221 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 WDR75Q8IWA0 830 aaKnown RBP10.12□□□□□ -0.79
CD44-206ENST00000415148 ULK2Q8IYT8 1036 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 CEP120Q8N960 986 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 STKLD1Q8NE28 680 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 GSTCDQ8NEC7 633 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 PCDH19Q8TAB3 1148 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 HPDLQ96IR7 371 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 TRIM4Q9C037 500 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 EBF3Q9H4W6 596 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 PRDM16Q9HAZ2 1276 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 HMGXB4Q9UGU5 601 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 GTF2IRD1Q9UHL9 959 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ITGA11Q9UKX5 1188 aa10.12□□□□□ -0.79
CD44-206ENST00000415148 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 SDR42E2A6NKP2 422 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 GPR25O00155 361 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 B4GALT5O43286 388 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 BUD23O43709 281 aaKnown RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 ALDH1A2O94788 518 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 RTN3O95197 1032 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 KLHL2O95198 593 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 MLNP12872 115 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 GRIA2P42262 883 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 GMPSP49915 693 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 AQP5P55064 265 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 PDE1BQ01064 536 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SLC6A3Q01959 620 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 NAB1Q13506 487 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 PEX6Q13608 980 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 LY6KQ17RY6 165 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 MAP1SQ66K74 1059 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 IFNLR1Q8IU57 520 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 TMEM192Q8IY95 271 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 NDUFAF2Q8N183 169 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 TRAPPC9Q96Q05 1148 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 CCDC28BQ9BUN5 200 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 NT5C1AQ9BXI3 368 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SHCBP1LQ9BZQ2 653 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SMARCAD1Q9H4L7 1026 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SLC17A6Q9P2U8 582 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 HBS1LQ9Y450 684 aaKnown RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 HEY1Q9Y5J3 304 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 PPP2R3BQ9Y5P8 575 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 A0A0G2JMZ2 1700 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 HMX2A2RU54 273 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 PIK3R2O00459 728 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 NOP56O00567 594 aaKnown RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 LYPLA1O75608 230 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 PFKMP08237 780 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 C6orf222P0C671 652 aaPredicted RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 CSH1P0DML2 217 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 CSH2P0DML3 217 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 CD1EP15812 388 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SDC4P31431 198 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 RBP5P82980 135 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SLC25A3Q00325 362 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 CDC16Q13042 620 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SEMA5AQ13591 1074 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SMAD1Q15797 465 aaKnown RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 CNPY1Q3B7I2 92 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 RALGPS1Q5JS13 557 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 LPCAT4Q643R3 524 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 STEAP4Q687X5 459 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 EFCAB12Q6NXP0 572 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 SCYL2Q6P3W7 929 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 MARK2Q7KZI7 788 aaKnown RBP10.11□□□□□ -0.79
CD44-206ENST00000415148 TMEM110Q86TL2 294 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 HACE1Q8IYU2 909 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 POU5F2Q8N7G0 328 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 PYDC1Q8WXC3 89 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 AZIN2Q96A70 460 aa10.11□□□□□ -0.79
CD44-206ENST00000415148 NLRP4Q96MN2 994 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms