RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 SCAMP5Q8TAC9 235 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 RNF217Q8TC41 542 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 FAM172AQ8WUF8 416 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 CENPIQ92674 756 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 CLP1Q92989 425 aaKnown RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 ITFG2Q969R8 447 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 RNF25Q96BH1 459 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 TLCD1Q96CP7 247 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 PGM2Q96G03 612 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 RBM41Q96IZ5 413 aaKnown RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 ZNF317Q96PQ6 595 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 SLC2A13Q96QE2 648 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 C11orf84Q9BUA3 381 aaPredicted RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 TRIM62Q9BVG3 475 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 FBXO44Q9H4M3 255 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 ZWILCHQ9H900 591 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 POPDC2Q9HBU9 364 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 RBM12Q9NTZ6 932 aaKnown RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 NOP53Q9NZM5 478 aaKnown RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 PCSK1NQ9UHG2 260 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 STAP1Q9ULZ2 295 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 USP18Q9UMW8 372 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 RPL26L1Q9UNX3 145 aaKnown RBP6.48□□□□□ -1.37
ITGB1-203ENST00000414670 SLC12A4Q9UP95 1085 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 PLAAQ9Y263 795 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 SSX2IPQ9Y2D8 614 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 SLC27A5Q9Y2P5 690 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 NR2E3Q9Y5X4 410 aa6.48□□□□□ -1.37
ITGB1-203ENST00000414670 TTC3P53804 2025 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 COL4A6Q14031 1691 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 LRRD1A4D1F6 860 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 LCHNA4D1U4 455 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CCDC85CA6NKD9 419 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 PI4K2BG5E9Z4 385 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 M0QYT0 321 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 FSCN2O14926 492 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SMNDC1O75940 238 aaKnown RBP eCLIP6.47□□□□□ -1.373e-8■□□□□ 9.4
ITGB1-203ENST00000414670 ENDOD1O94919 500 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 ABLIM3O94929 683 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 HEXIM1O94992 359 aaKnown RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SNUPNO95149 360 aaKnown RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 RTN3O95197 1032 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 VNN2O95498 520 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 FYNP06241 537 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 FAM153BP0C7A2 387 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 RARAP10276 462 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 RALAP11233 206 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 NCAM1P13591 858 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 TFE3P19532 575 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 DNAJB2P25686 324 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 IL1R2P27930 398 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 GCKP35557 465 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 BMPR1AP36894 532 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SKIV2L2P42285 1042 aaKnown RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 TUFMP49411 452 aaKnown RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 GPR15P49685 360 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 ATP1A2P50993 1020 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 HDAC4P56524 1084 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 COPS2P61201 443 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 YWHAGP61981 247 aaKnown RBP eCLIP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CREMQ03060 361 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 IFRD2Q12894 506 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 DUSP4Q13115 394 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 RAB33AQ14088 237 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 LBRQ14739 615 aaKnown RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SLC5A9Q2M3M2 681 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 FAM153CQ494X1 144 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 GALNTL6Q49A17 601 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 RAB6CQ53S08 254 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 KCNT1Q5JUK3 1230 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SDHAF4Q5VUM1 108 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SYPL2Q5VXT5 272 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 BSPRYQ5W0U4 402 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 AP1ARQ63HQ0 302 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 TPGS2Q68CL5 300 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CAPRIN2Q6IMN6 1127 aaKnown RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SCYL2Q6P3W7 929 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 MFSD7Q6UXD7 560 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 DENND5BQ6ZUT9 1274 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 BEND5Q7L4P6 421 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 BHLHA9Q7RTU4 235 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CPLX4Q7Z7G2 160 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SDCCAG8Q86SQ7 713 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 MON1AQ86VX9 555 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 MFN1Q8IWA4 741 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SH2D3CQ8N5H7 860 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 TTC9BQ8N6N2 239 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CCDC63Q8NA47 563 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 KLHL23Q8NBE8 558 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 KCTD6Q8NC69 237 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CMASQ8NFW8 434 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 ZNF461Q8TAF7 563 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 TEKT4Q8WW24 435 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 MAIP1Q8WWC4 291 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CASKIN2Q8WXE0 1202 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 HSPH1Q92598 858 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 NT5C3BQ969T7 300 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 ACSF2Q96CM8 615 aaPredicted RBP6.47□□□□□ -1.37
ITGB1-203ENST00000414670 CHMP6Q96FZ7 201 aa6.47□□□□□ -1.37
ITGB1-203ENST00000414670 SPATA17Q96L03 361 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms