RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 FOXP1Q9H334 677 aaPredicted RBP6.13□□□□□ -1.43
ATG4C-204ENST00000414558 VPS4AQ9UN37 437 aa6.13□□□□□ -1.43
ATG4C-204ENST00000414558 OR2W5A6NFC9 320 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 PMM2O15305 246 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 IGHMBP2P38935 993 aaKnown RBP6.12□□□□□ -1.43
ATG4C-204ENST00000414558 SLC12A2P55011 1212 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 SEMA3BQ13214 749 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 LCE1AQ5T7P2 110 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 ZNF793Q6ZN11 406 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 IRF2BP2Q7Z5L9 587 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 C11orf96Q7Z7L8 435 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATG4C-204ENST00000414558 ARFGAP1Q8N6T3 406 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 MPLKIPQ8TAP9 179 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 AKAP1Q92667 903 aaKnown RBP eCLIP6.12□□□□□ -1.43
ATG4C-204ENST00000414558 PMM1Q92871 262 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 VCPIP1Q96JH7 1222 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 ZFYVE19Q96K21 471 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 SENP7Q9BQF6 1050 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 NUDT22Q9BRQ3 303 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 WDR26Q9H7D7 661 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 POT1Q9NUX5 634 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 HEY2Q9UBP5 337 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 ZMYND8Q9ULU4 1186 aaPredicted RBP6.12□□□□□ -1.43
ATG4C-204ENST00000414558 HS3ST3B1Q9Y662 390 aa6.12□□□□□ -1.43
ATG4C-204ENST00000414558 C2CD4BA6NLJ0 364 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 NTN1O95631 604 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 VIPP01282 170 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 EGR1P18146 543 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 SCP2P22307 547 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 RPS6KB1P23443 525 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 GABRB3P28472 473 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 GSTM5P46439 218 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 ME1P48163 572 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 VPS41P49754 854 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 ARL13BQ3SXY8 428 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 EARS2Q5JPH6 523 aaKnown RBP6.11□□□□□ -1.43
ATG4C-204ENST00000414558 RAP1GAP2Q684P5 730 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 RBM44Q6ZP01 1051 aaKnown RBP6.11□□□□□ -1.43
ATG4C-204ENST00000414558 TFAP2DQ7Z6R9 452 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 DPP9Q86TI2 863 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 UEVLDQ8IX04 471 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 TXLNBQ8N3L3 684 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 OR52L2PQ8NGH6 319 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 EIF3CQ99613 913 aaKnown RBP6.11□□□□□ -1.43
ATG4C-204ENST00000414558 WACQ9BTA9 647 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 AGO4Q9HCK5 861 aaKnown RBP6.11□□□□□ -1.43
ATG4C-204ENST00000414558 TMEM8AQ9HCN3 771 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 GJB4Q9NTQ9 266 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 ASNSD1Q9NWL6 643 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 MAN2B2Q9Y2E5 1009 aa6.11□□□□□ -1.43
ATG4C-204ENST00000414558 C16orf96A6NNT2 1141 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 KRTAP29-1A8MX34 341 aaPredicted RBP6.1□□□□□ -1.43
ATG4C-204ENST00000414558 APAF1O14727 1248 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 NDST3O95803 873 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 HOXA7P31268 230 aaPredicted RBP6.1□□□□□ -1.43
ATG4C-204ENST00000414558 HOXD12P35452 270 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 FOXG1P55316 489 aaPredicted RBP6.1□□□□□ -1.43
ATG4C-204ENST00000414558 NSUN2Q08J23 767 aaKnown RBP eCLIP6.1□□□□□ -1.43
ATG4C-204ENST00000414558 MTA1Q13330 715 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 FHL1Q13642 323 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 CCDC144NLQ6NUI1 221 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 FAM57BQ71RH2 274 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 PJA1Q8NG27 643 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 NSMCE1Q8WV22 266 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 IGFBPL1Q8WX77 278 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 BRI3BPQ8WY22 251 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 TRMT61AQ96FX7 289 aaKnown RBP6.1□□□□□ -1.43
ATG4C-204ENST00000414558 TMEM45AQ9NWC5 275 aa6.1□□□□□ -1.43
ATG4C-204ENST00000414558 FAM90A10PA6NDY2 464 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 PRYO14603 147 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 IKBKBO14920 756 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 INSIG1O15503 277 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 PECAM1P16284 738 aaPredicted RBP6.09□□□□□ -1.43
ATG4C-204ENST00000414558 NDUFS1P28331 727 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 MTX1Q13505 466 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 PMS2P11Q13670 270 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 MAPKAPK3Q16644 382 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 GLE1Q53GS7 698 aaKnown RBP6.09□□□□□ -1.43
ATG4C-204ENST00000414558 HIBCHQ6NVY1 386 aaPredicted RBP6.09□□□□□ -1.43
ATG4C-204ENST00000414558 ACSM6Q6P461 480 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 PIM3Q86V86 326 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 CCDC136Q96JN2 1154 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 SCNM1Q9BWG6 230 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 NAA15Q9BXJ9 866 aaKnown RBP6.09□□□□□ -1.43
ATG4C-204ENST00000414558 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.09□□□□□ -1.43
ATG4C-204ENST00000414558 RGL1Q9NZL6 768 aa6.09□□□□□ -1.43
ATG4C-204ENST00000414558 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.09□□□□□ -1.43
ATG4C-204ENST00000414558 CCDC187A0A096LP49 1063 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 ANO9A1A5B4 782 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 SLC22A23A1A5C7 686 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 TRIM38O00635 465 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 TULP3O75386 442 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 SNHG28P0DPA3 235 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 ST6GAL1P15907 406 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 TFEBP19484 476 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 IDUAP35475 653 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 B4GALNT1Q00973 533 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 GAB1Q13480 694 aa6.08□□□□□ -1.44
ATG4C-204ENST00000414558 ELF2Q15723 593 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms