RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 A6NNZ2 444 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 HMGB1P1B2RPK0 211 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 EIF3HO15372 352 aaKnown RBP eCLIP10.37□□□□□ -0.75
DDB1-202ENST00000414411 LINC01565O15544 149 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SPOPO43791 374 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 FBXO21O94952 628 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 RTN3O95197 1032 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZBED1O96006 694 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 USP17L7P0C7H9 530 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 LCP1P13796 627 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 RRM1P23921 792 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CHRNA3P32297 505 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 MRPS5P82675 430 aaKnown RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 TUBB8Q3ZCM7 444 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 DNAJC21Q5F1R6 531 aaKnown RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 PPM1LQ5SGD2 360 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CYP4A22Q5TCH4 519 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PLEKHA7Q6IQ23 1121 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 OLFML1Q6UWY5 402 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CPNE8Q86YQ8 564 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 JAMLQ86YT9 394 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PLPP6Q8IY26 295 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CMASQ8NFW8 434 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 FEZF2Q8TBJ5 459 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CLEC4CQ8WTT0 213 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 NDRG1Q92597 394 aaKnown RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 CASP10Q92851 521 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZNF707Q96C28 371 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 PIWIL1Q96J94 861 aaKnown RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 BTBD6Q96KE9 485 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 GUCD1Q96NT3 240 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 GAS2L1Q99501 681 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 FMO2Q99518 471 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PRKD2Q9BZL6 878 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 ULBP1Q9BZM6 244 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 WDR35Q9P2L0 1181 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CNOT8Q9UFF9 292 aaKnown RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 STRIP2Q9ULQ0 834 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SCML2Q9UQR0 700 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PCDHA3Q9Y5H8 950 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CCDC195A0A1B0GUA6 201 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 GOLGA6L10A6NI86 522 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 LRG1P02750 347 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZDHHC11BP0C7U3 371 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 MYBL1P10243 752 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PYGMP11217 842 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 NR1D1P20393 614 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 IGFBP4P22692 258 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 YWHAQP27348 245 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 LTBRP36941 435 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SCNN1AP37088 669 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PGFP49763 221 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 DAOAP59103 153 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 GNGT1P63211 74 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SLC6A3Q01959 620 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZNF844Q08AG5 666 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 MAMLD1Q13495 774 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 VEPH1Q14D04 833 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SYCE2Q6PIF2 218 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 FAM183BPQ6ZVS7 135 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZDHHC14Q8IZN3 488 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SIX6OS1Q8N1H7 587 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 DEFB123Q8N688 67 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 C3orf20Q8ND61 904 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 IPO4Q8TEX9 1081 aaKnown RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 IRGQQ8WZA9 623 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 TRIM11Q96F44 468 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZNF512Q96ME7 567 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 TRIM31Q9BZY9 425 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 SYNCQ9H7C4 482 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 TMBIM4Q9HC24 238 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 AVENQ9NQS1 362 aaPredicted RBP10.37□□□□□ -0.75
DDB1-202ENST00000414411 ZDHHC18Q9NUE0 388 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 CLEC1BQ9P126 229 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 PCYOX1Q9UHG3 505 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 RASAL2Q9UJF2 1139 aa10.37□□□□□ -0.75
DDB1-202ENST00000414411 COL6A3P12111 3177 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 DENND4CQ5VZ89 1909 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 YJEFN3A6XGL0 299 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 E7ENQ6 273 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 CCL16O15467 120 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 PPFIA2O75334 1257 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 FYNP06241 537 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 MYZAPP0CAP1 466 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 PTGIRP43119 386 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 EPHA5P54756 1037 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 DRG2P55039 364 aaKnown RBP10.36□□□□□ -0.75
DDB1-202ENST00000414411 RWDD2BP57060 319 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 DHX9Q08211 1270 aaKnown RBP10.36□□□□□ -0.75
DDB1-202ENST00000414411 TAF10Q12962 218 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 TAF5Q15542 800 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 CYP1B1Q16678 543 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 SPDYCQ5MJ68 293 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 OR6B2Q6IFH4 312 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 ELMSAN1Q6PJG2 1045 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 TMEM92Q6UXU6 159 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 SLC26A9Q7LBE3 791 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 ARCQ7LC44 396 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 SCD5Q86SK9 330 aa10.36□□□□□ -0.75
DDB1-202ENST00000414411 TMEM150AQ86TG1 271 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms