RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LRRTM4Q86VH4 590 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 TTC16Q8NEE8 873 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 GPR152Q8TDT2 470 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 SEC14L1Q92503 715 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 CALML4Q96GE6 196 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 UNKQ9C0B0 810 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 MRPL46Q9H2W6 279 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PDGFCQ9NRA1 345 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 BMP2KQ9NSY1 1161 aaPredicted RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 TBCCD1Q9NVR7 557 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ITGB1BP2Q9UKP3 347 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 RIMKLBQ9ULI2 386 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 UTP11Q9Y3A2 253 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 BACH1O14867 736 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 MTSS1O43312 755 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA12O60330 932 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 MAN1A2O60476 641 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 FBXO24O75426 580 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 OPN1MWP04001 364 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PSAPP07602 524 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 LINGO3P0C6S8 592 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 OPN1MW2P0DN77 364 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 OPN1MW3P0DN78 364 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 IMPDH2P12268 514 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 CHN1P15882 459 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 GBP1P32455 592 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 AFF3P51826 1226 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 NCALDP61601 193 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 DHX9Q08211 1270 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 LBRQ14739 615 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 LY6KQ17RY6 165 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 FAM110CQ1W6H9 321 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 GNPTABQ3T906 1256 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 TMEM119Q4V9L6 283 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 DCAF17Q5H9S7 520 aaPredicted RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 TMEM92Q6UXU6 159 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 GK5Q6ZS86 529 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 CYFIP1Q7L576 1253 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 RBBP8NLQ8NC74 664 aaPredicted RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 SIMC1Q8NDZ2 872 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 NANOS1Q8WY41 292 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 LARP4BQ92615 738 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 KLHL29Q96CT2 875 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 TEKT3Q9BXF9 490 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 OSBPL1AQ9BXW6 950 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 OR10A4Q9H209 315 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ECT2Q9H8V3 914 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ATP13A1Q9HD20 1204 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 INTS9Q9NV88 658 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 CTNNAL1Q9UBT7 734 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 ATP11BQ9Y2G3 1177 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA9Q9Y5G4 932 aaKnown RBP9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA8Q9Y5G5 932 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA7Q9Y5G6 932 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA6Q9Y5G7 932 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA3Q9Y5H0 932 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 PCDHGA2Q9Y5H1 932 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 SNX8Q9Y5X2 465 aa9.74□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC37A2A6NM11 1700 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 ADGRA2Q96PE1 1338 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 MYMKA6NI61 221 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 KCNK3O14649 394 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 SMIM24O75264 130 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 SLITRK3O94933 977 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 SGPL1O95470 568 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 NUDT17P0C025 328 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 RARAP10276 462 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 MAPK10P53779 464 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 EPHA4P54764 986 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 COPS2P61201 443 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 IFI35P80217 286 aaPredicted RBP9.73□□□□□ -0.85
SNHG3-201ENST00000413987 SLC14A1Q13336 389 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 STXBP2Q15833 593 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 SLC18A3Q16572 532 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 ZNF674Q2M3X9 581 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 C15orf59Q2T9L4 293 aaPredicted RBP9.73□□□□□ -0.85
SNHG3-201ENST00000413987 GALNTL6Q49A17 601 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 THEMIS2Q5TEJ8 643 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 TPGS2Q68CL5 300 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 CENPPQ6IPU0 288 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 LRRC34Q8IZ02 419 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 PRR18Q8N4B5 295 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 RAD54LQ92698 747 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 COPS5Q92905 334 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 CAPNS2Q96L46 248 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 RAB3IPQ96QF0 476 aaPredicted RBP9.73□□□□□ -0.85
SNHG3-201ENST00000413987 CRLF2Q9HC73 371 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 ARHGEF3Q9NR81 526 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.73□□□□□ -0.85
SNHG3-201ENST00000413987 SPATA7Q9P0W8 599 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 MORF4L1Q9UBU8 362 aa9.73□□□□□ -0.85
SNHG3-201ENST00000413987 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 TRBV23-1A0A0A0MS06 115 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 O00370 1275 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 TLR2O60603 784 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 SUN1O94901 812 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 AGTP01019 485 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 SRGAP2BP0DMP2 458 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 BCRP11274 1271 aa9.72□□□□□ -0.85
SNHG3-201ENST00000413987 IL11P20809 199 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms