RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 SOCS7O14512 581 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 SERPINA6P08185 405 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 SP100P23497 879 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 HDAC4P56524 1084 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 GBE1Q04446 702 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 AMHR2Q16671 573 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 KYAT1Q16773 422 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 GADL1Q6ZQY3 521 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 FBXO16Q8IX29 292 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 SCUBE3Q8IX30 993 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 ULK2Q8IYT8 1036 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 ZNF184Q99676 751 aaPredicted RBP19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 THTPAQ9BU02 230 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 BRCA1P38398 1863 aaKnown RBP19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 CITO14578 2027 aa19.64■□□□□ 0.73
TNFRSF8-202ENST00000413146 TOMM70O94826 608 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 STAU1O95793 577 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 ZFXP17010 805 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 IRX4P78413 519 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 SARNPP82979 210 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 VGLL4Q14135 290 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 KYAT3Q6YP21 454 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 TIFABQ6ZNK6 161 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 RIPOR1Q6ZS17 1223 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 DHX35Q9H5Z1 703 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 C2CD2Q9Y426 696 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 PPP2R3BQ9Y5P8 575 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 DCAF8L1A6NGE4 600 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 PRR5-ARHGAP8B1AHC4 643 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 FZD9O00144 591 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 PPP1R12AO14974 1030 aaPredicted RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 TOP3BO95985 862 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 SNX16P57768 344 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 ARHGAP8P85298 464 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 DBN1Q16643 649 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 HEATR6Q6AI08 1181 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 TTC30AQ86WT1 665 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 WDR75Q8IWA0 830 aaKnown RBP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 ADGRF2Q8IZF7 708 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 AFG1LQ8WV93 481 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 QKIQ96PU8 341 aaKnown RBP eCLIP19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 SLC4A5Q9BY07 1137 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 FAM49BQ9NUQ9 324 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 HESX1Q9UBX0 185 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 MCM3APO60318 1980 aa19.63■□□□□ 0.73
TNFRSF8-202ENST00000413146 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 ENO4A6NNW6 628 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SETSIPP0DME0 302 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 ARF4P18085 180 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 GRIA1P42261 906 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 POU5F1BQ06416 359 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 FASTKD1Q53R41 847 aaKnown RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 KCNT2Q6UVM3 1135 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 ACOT1Q86TX2 421 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 CCDC33Q8N5R6 958 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 CLPTM1LQ96KA5 538 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 PANX3Q96QZ0 392 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 EBF4Q9BQW3 602 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SIKE1Q9BRV8 207 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 RNPEPQ9H4A4 650 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 KRT82Q9NSB4 513 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SPATS2LQ9NUQ6 558 aaKnown RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 ERAP1Q9NZ08 941 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 AKT3Q9Y243 479 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 PAPSS1O43252 624 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 TXNP10599 105 aaKnown RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 L1CAMP32004 1257 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 NR2C2P49116 596 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 AP2B1P63010 937 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SLC10A2Q12908 348 aaPredicted RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SEMA5AQ13591 1074 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 UBAP2LQ14157 1087 aaKnown RBP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 DPYSL2Q16555 572 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 NBPF20Q3BBV1 942 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 C1orf146Q5VVC0 180 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 CASC4Q6P4E1 433 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 TMEM110Q86TL2 294 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 KHSRPQ92945 711 aaKnown RBP eCLIP19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 KIF12Q96FN5 646 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 FGD4Q96M96 766 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 C1orf21Q9H246 121 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 R3HDMLQ9H3Y0 253 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 MOCS1Q9NZB8 636 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SORCS3Q9UPU3 1222 aa19.62■□□□□ 0.73
TNFRSF8-202ENST00000413146 SDR42E2A6NKP2 422 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 USP2O75604 605 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 ANPEPP15144 967 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 ACTR3P61158 418 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 PKDCCQ504Y2 493 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 DENND5BQ6ZUT9 1274 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 MARK2Q7KZI7 788 aaKnown RBP19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 TSC22D3Q99576 134 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 SLC7A8Q9UHI5 535 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 AP4E1Q9UPM8 1137 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 SMIM24O75264 130 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 GLRA3O75311 464 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 TFE3P19532 575 aaPredicted RBP19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 STXBP5Q5T5C0 1151 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 ZDHHC17Q8IUH5 632 aa19.61■□□□□ 0.73
TNFRSF8-202ENST00000413146 PIWIL2Q8TC59 973 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms