RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 CLCN6P51797 869 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 TBX4P57082 545 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 YWHAZP63104 245 aaKnown RBP13.7□□□□□ -0.22
SSB-203ENST00000413002 SRSF5Q13243 272 aaKnown RBP13.7□□□□□ -0.22
SSB-203ENST00000413002 FBXO43Q4G163 708 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 MAMSTRQ6ZN01 415 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 PHLDB2Q86SQ0 1253 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 TAC4Q86UU9 113 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 DEFB106AQ8N104 65 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 ALLCQ8N6M5 410 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 USP33Q8TEY7 942 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 CPA5Q8WXQ8 436 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 NOX5Q96PH1 765 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 HHIPQ96QV1 700 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 ERGIC2Q96RQ1 377 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 IER2Q9BTL4 223 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 RTN4Q9NQC3 1192 aaKnown RBP13.7□□□□□ -0.22
SSB-203ENST00000413002 COX16Q9P0S2 106 aa13.7□□□□□ -0.22
SSB-203ENST00000413002 NOCTQ9UK39 431 aaKnown RBP13.7□□□□□ -0.22
SSB-203ENST00000413002 SART1O43290 800 aaKnown RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 CACNG3O60359 315 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 KLF8O95600 359 aaPredicted RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 MOCS2O96007 188 aaPredicted RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 PTMSP20962 102 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 CHKAP35790 457 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 EIF2DP41214 584 aaKnown RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 STAT1P42224 750 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 WASP42768 502 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 SGSHP51688 502 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 RNASE9P60153 205 aaKnown RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 ZNF528Q3MIS6 628 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 DCAF6Q58WW2 860 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 C10orf76Q5T2E6 689 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 NAA35Q5VZE5 725 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 GRAMD4Q6IC98 578 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 RFWD3Q6PCD5 774 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 TMEM35BQ8NCS4 154 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 ATRIPQ8WXE1 791 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 FCRL2Q96LA5 508 aaPredicted RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 POPDC2Q9HBU9 364 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 MARK1Q9P0L2 795 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 WDR35Q9P2L0 1181 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 XPO7Q9UIA9 1087 aaKnown RBP13.69□□□□□ -0.22
SSB-203ENST00000413002 HCN2Q9UL51 889 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 SLC8A2Q9UPR5 921 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 ZNF510Q9Y2H8 683 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 MYO15AQ9UKN7 3530 aa13.69□□□□□ -0.22
SSB-203ENST00000413002 DMDP11532 3685 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 PRRT4C9JH25 899 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 GOLGA8SH3BPF8 625 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 ATG13O75143 517 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 TRUB2O95900 331 aaKnown RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 SERPINC1P01008 464 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 PENKP01210 267 aaPredicted RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 IGLV3-27P01718 113 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 CISD3P0C7P0 127 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 HNRNPLP14866 589 aaKnown RBP eCLIP13.68□□□□□ -0.22
SSB-203ENST00000413002 SLC6A4P31645 630 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 KIR2DL1P43626 348 aaPredicted RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 DGKGP49619 791 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 FMO1Q01740 532 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 DMC1Q14565 340 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 PPP2R5DQ14738 602 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 LPAL2Q16609 132 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 SKOR2Q2VWA4 1001 aaPredicted RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 ZC3H12AQ5D1E8 599 aaKnown RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 NADSYN1Q6IA69 706 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 ERICH1Q86X53 443 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 TERB1Q8NA31 727 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 IL17RCQ8NAC3 791 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 TXNDC5Q8NBS9 432 aaKnown RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 ZBTB44Q8NCP5 570 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 IPO4Q8TEX9 1081 aaKnown RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 NELL1Q92832 810 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 NKD2Q969F2 451 aaPredicted RBP13.68□□□□□ -0.22
SSB-203ENST00000413002 MYEOVQ96EZ4 313 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 PCDHB18PQ96TA0 734 aa13.68□□□□□ -0.22
SSB-203ENST00000413002 PIEZO1Q92508 2521 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 A0A0A0MRY4 1105 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 PRR23AA6NEV1 266 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 PROB1E7EW31 1015 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 SGK1O00141 431 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 ACSL4O60488 711 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 GFRA3O60609 400 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 CHRM1P11229 460 aaPredicted RBP13.67□□□□□ -0.22
SSB-203ENST00000413002 TFE3P19532 575 aaPredicted RBP13.67□□□□□ -0.22
SSB-203ENST00000413002 CDH5P33151 784 aaPredicted RBP13.67□□□□□ -0.22
SSB-203ENST00000413002 NOMO3P69849 1222 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 CDR2Q01850 454 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 FILIP1LQ4L180 1135 aa13.67□□□□□ -0.22
SSB-203ENST00000413002 EFHC1Q5JVL4 640 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms