RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 RHOBTB2Q9BYZ6 727 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 INPP5FQ9Y2H2 1132 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 HHLA1C9JL84 531 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 H3BRJ5 948 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 CAPN9O14815 690 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 MFSD11O43934 449 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 SPAG7O75391 227 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 APRTP07741 180 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 STX2P32856 288 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 FAM26DQ5JW98 314 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 ADGRD1Q6QNK2 874 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 CD300LGQ6UXG3 332 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 PIGWQ7Z7B1 504 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 SLC7A14Q8TBB6 771 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 PRDM16Q9HAZ2 1276 aa25.41■■□□□ 1.66
VRK2-202ENST00000412104 TCP11X1B4DZS4 312 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 PRPF4O43172 522 aaKnown RBP eCLIP25.4■■□□□ 1.66
VRK2-202ENST00000412104 DGKIO75912 1065 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 PIAS1O75925 651 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 USP17L7P0C7H9 530 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 SP3Q02447 781 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 HEATR6Q6AI08 1181 aaKnown RBP25.4■■□□□ 1.66
VRK2-202ENST00000412104 CTU1Q7Z7A3 348 aaKnown RBP25.4■■□□□ 1.66
VRK2-202ENST00000412104 VPS52Q8N1B4 723 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 OTUD6BQ8N6M0 293 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 HASPINQ8TF76 798 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 TFB1MQ8WVM0 346 aaKnown RBP25.4■■□□□ 1.66
VRK2-202ENST00000412104 SGSM3Q96HU1 749 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 SMC6Q96SB8 1091 aa25.4■■□□□ 1.66
VRK2-202ENST00000412104 C9IYK1 514 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 METTL18O95568 372 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 VAV1P15498 845 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 TUSC3Q13454 348 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 CAND1Q86VP6 1230 aaKnown RBP25.39■■□□□ 1.66
VRK2-202ENST00000412104 METTL23Q86XA0 190 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 C4orf33Q8N1A6 199 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 CCDC197Q8NCU1 140 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 ACBD6Q9BR61 282 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 SAMD15Q9P1V8 674 aa25.39■■□□□ 1.66
VRK2-202ENST00000412104 TCRBV9S1A1TA0A576 114 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 HACD1B0YJ81 288 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 CYP11A1P05108 521 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 YWHAGP61981 247 aaKnown RBP eCLIP25.39■■□□□ 1.65
VRK2-202ENST00000412104 RNF187Q5TA31 235 aaPredicted RBP25.39■■□□□ 1.65
VRK2-202ENST00000412104 BZW1Q7L1Q6 419 aaKnown RBP25.39■■□□□ 1.65
VRK2-202ENST00000412104 MCUQ8NE86 351 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 ADAM32Q8TC27 787 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 DCAKDQ8WVC6 231 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 CYTH2Q99418 400 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 CSNK1G1Q9HCP0 422 aa25.39■■□□□ 1.65
VRK2-202ENST00000412104 WDR6Q9NNW5 1121 aaKnown RBP25.39■■□□□ 1.65
VRK2-202ENST00000412104 SMG5Q9UPR3 1016 aaKnown RBP25.39■■□□□ 1.65
VRK2-202ENST00000412104 A0A1W2PPM1 405 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 CREB3O43889 395 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 AOC2O75106 756 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 SPAG6O75602 509 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 LTFP02788 710 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 NCAM1P13591 858 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 INTS6LQ5JSJ4 861 aaKnown RBP25.38■■□□□ 1.65
VRK2-202ENST00000412104 FAM171BQ6P995 826 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 RNF180Q86T96 592 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 HTR3CQ8WXA8 447 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 MAGEB18Q96M61 343 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 SLC9A7Q96T83 725 aa25.38■■□□□ 1.65
VRK2-202ENST00000412104 ELAC2Q9BQ52 826 aaKnown RBP25.38■■□□□ 1.65
VRK2-202ENST00000412104 SF3B1O75533 1304 aaKnown RBP eCLIP25.38■■□□□ 1.652e-6■■■■■ 172.3
VRK2-202ENST00000412104 M0QZQ0 153 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 SKIP12755 728 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 MSH2P43246 934 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 ACLYP53396 1101 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 SLC18A1P54219 525 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 AIF1P55008 147 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 WDR4P57081 412 aaKnown RBP25.37■■□□□ 1.65
VRK2-202ENST00000412104 NOGQ13253 232 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 DPYSQ14117 519 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 BHLHA9Q7RTU4 235 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 ZNF598Q86UK7 904 aaKnown RBP25.37■■□□□ 1.65
VRK2-202ENST00000412104 ECHDC2Q86YB7 292 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 NTAN1Q96AB6 310 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 TGS1Q96RS0 853 aaKnown RBP25.37■■□□□ 1.65
VRK2-202ENST00000412104 LGMNQ99538 433 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 FGFR1OP2Q9NVK5 253 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 FRMPD3Q5JV73 1810 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 EEF2KO00418 725 aaKnown RBP25.37■■□□□ 1.65
VRK2-202ENST00000412104 CABYRO75952 493 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 TPSB2P20231 275 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 ADRA1BP35368 520 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 MAGEA9P43362 315 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 TPSAB1Q15661 275 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 MAP3K21Q5TCX8 1036 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 RFX8Q6ZV50 586 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 DENND1AQ8TEH3 1009 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 MZB1Q8WU39 189 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 CFAP36Q96G28 342 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 UROC1Q96N76 676 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 DSEQ9UL01 958 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 NR2E3Q9Y5X4 410 aa25.37■■□□□ 1.65
VRK2-202ENST00000412104 SCAPQ12770 1279 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 NUGGCQ68CJ6 796 aa25.36■■□□□ 1.65
VRK2-202ENST00000412104 CCDC121Q6ZUS5 278 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms