RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 FAXCQ5TGI0 409 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CACHD1Q5VU97 1274 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 B3GNTL1Q67FW5 361 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 FCRL6Q6DN72 434 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 SFRP4Q6FHJ7 346 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 RINT1Q6NUQ1 792 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ARMC6Q6NXE6 501 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ATF7IPQ6VMQ6 1270 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 MFSD6Q6ZSS7 791 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 H1FNTQ75WM6 255 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 SYT13Q7L8C5 426 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF280BQ86YH2 543 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ADGRG5Q8IZF4 528 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 MSANTD4Q8NCY6 345 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 BPIFB1Q8TDL5 484 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 SNX19Q92543 992 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 RSC1A1Q92681 617 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 RNF31Q96EP0 1072 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CALML4Q96GE6 196 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 BOD1Q96IK1 185 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 APOPT1Q96IL0 206 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 PTDSS2Q9BVG9 487 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 KLC2Q9H0B6 622 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 USP44Q9H0E7 712 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 VPS16Q9H269 839 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 DBNDD1Q9H9R9 158 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 G6PC2Q9NQR9 355 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ABCF3Q9NUQ8 709 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 DNMT3BQ9UBC3 853 aaKnown RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 DKK4Q9UBT3 224 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 HSF4Q9ULV5 492 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CAMK2AQ9UQM7 478 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 NAALADL1Q9UQQ1 740 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 TMEM5Q9Y2B1 443 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 DNAJC16Q9Y2G8 782 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.95□□□□□ -1.62
BRCA1-204ENST00000412061 PSAT1Q9Y617 370 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 CDY1Q9Y6F8 540 aa4.95□□□□□ -1.62
BRCA1-204ENST00000412061 VWA3AA6NCI4 1184 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PTGES3LE9PB15 166 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 F5H697 171 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TRIAP1O43715 76 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TSPAN3O60637 253 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 FAM20BO75063 409 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PPP6R2O75170 966 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 ERAL1O75616 437 aaKnown RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PIAS2O75928 621 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TSPAN9O75954 239 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 NCR1O76036 304 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 RASAL1O95294 804 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 ANXA6P08133 673 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CSH1P0DML2 217 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CSH2P0DML3 217 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CPA1P15085 419 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CD6P30203 668 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PPIFP30405 207 aaKnown RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 ACSL1P33121 698 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PAFAH1B1P43034 410 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 DGKEP52429 567 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 RBM5P52756 815 aaKnown RBP eCLIP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PRKAG1P54619 331 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 RPP30P78346 268 aaKnown RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 MYO1EQ12965 1108 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 MPP3Q13368 585 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 E2F2Q14209 437 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CYP2A13Q16696 494 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CD300EQ496F6 205 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 FAM69AQ5T7M9 428 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 KLHL24Q6TFL4 600 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 MICALCLQ6ZW33 695 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 DNAJB7Q7Z6W7 309 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PXKQ7Z7A4 578 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 RASGRP3Q8IV61 690 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 HSCBQ8IWL3 235 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TTC39CQ8N584 583 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 USP38Q8NB14 1042 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 USP6NLQ92738 828 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TMEM125Q96AQ2 219 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 SH3KBP1Q96B97 665 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PKNOX2Q96KN3 472 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 C20orf173Q96LM9 149 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 JAKMIP1Q96N16 626 aaKnown RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 OSBPL9Q96SU4 736 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 ALOXE3Q9BYJ1 711 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 ZNF768Q9H5H4 540 aaKnown RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 GALNT9Q9HCQ5 603 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 AKIP1Q9NQ31 210 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CCDC177Q9NQR7 707 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TMEM74BQ9NUR3 256 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 PARPBPQ9NWS1 579 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 TBC1D14Q9P2M4 693 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 KCND3Q9UK17 655 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 CA14Q9ULX7 337 aa4.94□□□□□ -1.62
BRCA1-204ENST00000412061 C19orf53Q9UNZ5 99 aaPredicted RBP4.94□□□□□ -1.62
BRCA1-204ENST00000412061 MARCH11A6NNE9 402 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 KLK10O43240 276 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 RGS10O43665 173 aa4.93□□□□□ -1.62
BRCA1-204ENST00000412061 BEST1O76090 585 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms